Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
FOXF1Q12946 OR51A3P-201ENST00000413596 924 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 BX682237.1-201ENST00000415016 335 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 AL121882.1-201ENST00000422893 417 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AC010881.1-201ENST00000433830 235 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 RPS15AP28-201ENST00000435088 386 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 HSFY3P-201ENST00000444242 1191 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AC004022.1-201ENST00000447766 1066 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 AC078857.1-201ENST00000469870 667 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 RPS23P3-201ENST00000470993 430 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 HSPE1P6-201ENST00000479457 291 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 GAPDHP39-201ENST00000481866 979 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 AC004062.1-201ENST00000509926 645 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 PRELID3BP4-201ENST00000515476 571 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AP003467.2-201ENST00000520175 319 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXF1Q12946 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXF1Q12946 AC105137.2-201ENST00000569073 466 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 MIR4446-201ENST00000578505 67 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXF1Q12946 RPL23AP78-201ENST00000599928 470 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AC128687.1-201ENST00000605304 619 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
FOXF1Q12946 AC009159.1-201ENST00000618386 642 ntBASIC2.11□□□□□ -2.07
FOXF1Q12946 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXF1Q12946 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
FOXF1Q12946 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXF1Q12946 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
FOXF1Q12946 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
FOXF1Q12946 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
FOXF1Q12946 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
FOXF1Q12946 AL359693.1-201ENST00000614959 2407 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 RNA5SP258-201ENST00000362750 119 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 RNU6-263P-201ENST00000363811 107 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 RNU6-619P-201ENST00000365146 108 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 RNU6-1027P-201ENST00000383998 107 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AP002784.2-201ENST00000397300 549 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXF1Q12946 RPS6P14-201ENST00000425165 719 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 MTATP6P11-201ENST00000428071 670 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXF1Q12946 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXF1Q12946 UBBP3-201ENST00000445497 241 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 RPL7P55-201ENST00000450522 746 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.1□□□□□ -2.07
FOXF1Q12946 AL445669.2-201ENST00000454425 421 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXF1Q12946 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXF1Q12946 AC027338.1-201ENST00000514840 825 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 RNU6-416P-201ENST00000516265 103 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AP003122.3-201ENST00000526316 255 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
FOXF1Q12946 AC125611.2-201ENST00000551907 647 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXF1Q12946 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.1□□□□□ -2.07
FOXF1Q12946 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXF1Q12946 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.1□□□□□ -2.07
FOXF1Q12946 BPTFP1-201ENST00000579209 492 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.1□□□□□ -2.07
FOXF1Q12946 AC133794.1-201ENST00000602731 914 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AP002906.1-201ENST00000603405 233 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AC007938.3-201ENST00000604965 623 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 MIR8084-201ENST00000614105 89 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 AC091948.2-201ENST00000636510 279 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
FOXF1Q12946 AL163152.1-201ENST00000642001 374 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 ZNF849P-201ENST00000594711 1566 ntBASIC2.1□□□□□ -2.07
FOXF1Q12946 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
FOXF1Q12946 SGO1P1-201ENST00000603525 1447 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC138915.1-201ENST00000565427 1685 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
FOXF1Q12946 RNU6-441P-201ENST00000384545 106 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 MIR16-1-201ENST00000385271 89 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 RNU6-932P-201ENST00000391108 106 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 RNU4-78P-201ENST00000410940 126 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC009237.2-201ENST00000421358 284 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AL512661.1-201ENST00000434586 1253 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.09□□□□□ -2.07
FOXF1Q12946 RPS26P30-201ENST00000443431 335 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 HIGD1AP2-201ENST00000446367 280 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AL050341.1-201ENST00000447743 313 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
FOXF1Q12946 EEF1B2P7-201ENST00000451177 676 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.09□□□□□ -2.07
FOXF1Q12946 CDC42P1-201ENST00000456658 548 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms