Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MTND4P35-201ENST00000604257 1375 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AL022578.1-201ENST00000439330 1433 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 ZNF90P1-201ENST00000480493 1951 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC062016.1-201ENST00000355719 319 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 MIR21-201ENST00000362134 72 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 CYCSP45-201ENST00000402289 315 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 MIR1303-201ENST00000408625 86 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 RNU6-712P-201ENST00000410558 100 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 RNU2-40P-201ENST00000410833 196 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC234781.2-201ENST00000426370 994 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC091390.3-201ENST00000426478 338 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 ATP5F1P1-201ENST00000433775 569 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 UBE2FP3-201ENST00000436366 524 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 ARPC3P1-201ENST00000437218 533 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 Z99127.2-201ENST00000441426 334 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 XKRY-201ENST00000510392 1100 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 TTC39CP1-201ENST00000512513 755 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC025755.1-201ENST00000521306 278 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC021269.2-201ENST00000532318 330 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC078814.3-201ENST00000553036 491 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AL442163.2-201ENST00000553912 710 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 EIF4BP1-201ENST00000554881 351 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AL138976.2-201ENST00000563989 694 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC105137.2-201ENST00000569073 466 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 BNIP3P22-201ENST00000593399 556 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 APOOP1-201ENST00000604695 592 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AC005332.10-201ENST00000612725 619 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 AL449363.1-201ENST00000617815 186 ntBASIC1.79□□□□□ -2.12
HIST1H1AQ02539 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.79□□□□□ -2.12
HIST1H1AQ02539 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 KPNA2P1-201ENST00000458289 1591 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 FTLP6-201ENST00000355274 422 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 MIR767-201ENST00000390228 109 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AP002784.2-201ENST00000397300 549 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AL359511.1-201ENST00000402970 211 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 SNORD23.1-201ENST00000408212 104 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 HMGB3P31-201ENST00000413333 595 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 NUP35P1-201ENST00000422734 947 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 MTATP6P11-201ENST00000428071 670 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC128713.1-201ENST00000471495 306 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 RNA5SP24-201ENST00000516478 95 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 UBTFL10-201ENST00000528532 562 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC118942.1-201ENST00000529674 1035 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AGGF1P5-201ENST00000567900 919 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC002984.1-201ENST00000591692 448 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AL033523.1-201ENST00000605153 153 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC025594.3-201ENST00000613068 790 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 VN1R74P-201ENST00000613259 503 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 MIR6817-201ENST00000615588 66 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AP006248.3-201ENST00000623580 594 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 MTND2P41-201ENST00000637599 773 ntBASIC1.78□□□□□ -2.12
HIST1H1AQ02539 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HIST1H1AQ02539 AC069528.2-201ENST00000624849 1991 ntBASIC1.78□□□□□ -2.13
HIST1H1AQ02539 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.13
HIST1H1AQ02539 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC016717.2-201ENST00000609089 5141 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 FAM133CP-201ENST00000332869 704 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 SNORA80A-201ENST00000363922 136 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 SNORA3A-201ENST00000364113 130 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 RNU6-1226P-201ENST00000384317 107 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AL445529.1-201ENST00000398713 389 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 RNU6-920P-201ENST00000410926 92 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 SEPT2P1-201ENST00000419651 180 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC007560.1-201ENST00000426912 237 ntBASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.77□□□□□ -2.13
HIST1H1AQ02539 ARF4P4-201ENST00000439608 520 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms