Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX6-1P78426 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX6-1P78426 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 XIAPP3-201ENST00000312918 795 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 Y_RNA.88-201ENST00000363029 99 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 RNU6-179P-201ENST00000363350 107 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 RNA5SP167-201ENST00000365461 116 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 Y_RNA.381-201ENST00000365666 102 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 LAP3P1-201ENST00000403648 294 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AL591416.1-201ENST00000404015 867 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 Y_RNA.604-201ENST00000410574 102 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC009237.10-201ENST00000414112 510 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AL139413.1-201ENST00000421309 217 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC008850.1-201ENST00000427546 362 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 MTATP6P16-201ENST00000434543 526 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AC016691.1-201ENST00000441321 413 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX6-1P78426 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX6-1P78426 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX6-1P78426 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC109327.1-201ENST00000471666 403 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX6-1P78426 RPL23AP84-201ENST00000571193 464 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AC069061.3-201ENST00000582254 823 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC010133.1-201ENST00000615809 842 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 SNX18P1Y-201ENST00000616231 511 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 LINC00901.1-201ENST00000617252 152 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX6-1P78426 AC099654.14-201ENST00000638599 341 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 BDP1P-201ENST00000582658 1990 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.1□□□□□ -1.75
NKX6-1P78426 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX6-1P78426 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
NKX6-1P78426 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX6-1P78426 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NKX6-1P78426 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
NKX6-1P78426 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 MIR23B-201ENST00000384832 97 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 U3.35-201ENST00000408405 208 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 TOMM22P1-201ENST00000418578 312 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.09□□□□□ -1.75
NKX6-1P78426 SDCBPP3-201ENST00000419629 891 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 SNRPEP10-201ENST00000420249 274 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX6-1P78426 RPL7L1P10-201ENST00000427790 463 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AC069285.2-201ENST00000440210 275 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 VN1R34P-201ENST00000447387 883 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 RPL23AP31-201ENST00000456160 467 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 VN1R105P-201ENST00000486595 910 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AC078918.1-201ENST00000498515 228 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AC023141.12-201ENST00000512399 199 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 RNU6-1073P-201ENST00000517182 106 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 SNORA31.22-201ENST00000517204 135 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 IGKV2D-23-201ENST00000518179 286 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX6-1P78426 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX6-1P78426 SNRPGP16-201ENST00000533275 226 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 FKBP1BP1-201ENST00000553366 325 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AC105129.1-201ENST00000560250 297 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AC007224.1-201ENST00000564410 144 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AC007390.2-201ENST00000606229 3803 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AL158196.1-201ENST00000616786 434 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX6-1P78426 AL589994.2-201ENST00000621124 579 ntBASIC4.09□□□□□ -1.75
NKX6-1P78426 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX6-1P78426 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX6-1P78426 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms