Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL592437.1-201ENST00000443781 492 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AL500527.1-201ENST00000448532 255 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCNA1P78396 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNA1P78396 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNA1P78396 AC084024.2-201ENST00000503480 791 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AC008413.1-201ENST00000511864 177 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 SNORA70.16-201ENST00000516390 95 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNA1P78396 AC087373.1-201ENST00000524920 491 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AL512310.1-201ENST00000548639 172 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 SNRPGP1-201ENST00000553864 222 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNA1P78396 MTCO1P40-201ENST00000574371 625 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNA1P78396 AC124283.4-201ENST00000581815 456 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.1□□□□□ -1.91
CCNA1P78396 AC002487.1-201ENST00000604565 994 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 HSPE1P7-201ENST00000604681 321 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AC019159.1-201ENST00000605094 187 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AL118556.2-201ENST00000614375 824 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 Z99129.2-201ENST00000619967 314 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AL356585.4-201ENST00000623078 1229 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNA1P78396 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.1□□□□□ -1.91
CCNA1P78396 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCNA1P78396 AC008568.2-201ENST00000623862 2313 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 TPTE2P4-201ENST00000258589 1605 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.09□□□□□ -1.91
CCNA1P78396 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.09□□□□□ -1.91
CCNA1P78396 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCNA1P78396 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 SNORD116-23-201ENST00000384645 92 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCNA1P78396 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.09□□□□□ -1.91
CCNA1P78396 AL445183.3-201ENST00000414168 502 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 FCF1P2-201ENST00000415284 583 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 NDUFB4P5-201ENST00000415445 361 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNA1P78396 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNA1P78396 BTBD7P2-201ENST00000441962 620 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.09□□□□□ -1.91
CCNA1P78396 AL513124.1-201ENST00000450410 614 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 RFC5P1-201ENST00000454419 874 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 RPL21P131-201ENST00000497298 483 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 KLRA1P-201ENST00000503499 986 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 AC112518.2-201ENST00000508565 425 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
CCNA1P78396 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.09□□□□□ -1.91
CCNA1P78396 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.09□□□□□ -1.91
CCNA1P78396 U73023.1-201ENST00000603134 700 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 AC131902.3-201ENST00000611767 581 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 AL359757.2-201ENST00000624309 274 ntBASIC3.09□□□□□ -1.91
CCNA1P78396 AP000526.1-201ENST00000603308 1388 ntBASIC3.09□□□□□ -1.92
CCNA1P78396 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.09□□□□□ -1.92
CCNA1P78396 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.92
CCNA1P78396 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CCNA1P78396 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNA1P78396 ZNF519P1-201ENST00000449011 1626 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCNA1P78396 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCNA1P78396 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCNA1P78396 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCNA1P78396 OR1L1-202ENST00000373686 1083 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CCNA1P78396 RNU6-481P-201ENST00000384194 107 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 RNU6-878P-201ENST00000384578 110 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 MIR887-201ENST00000401258 79 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNA1P78396 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNA1P78396 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNA1P78396 AL590639.1-201ENST00000456484 337 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.08□□□□□ -1.92
CCNA1P78396 YWHAEP4-201ENST00000505390 198 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCNA1P78396 AL359273.1-201ENST00000510918 627 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 RNU6-1102P-201ENST00000516149 96 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.08□□□□□ -1.92
CCNA1P78396 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCNA1P78396 AP000867.2-201ENST00000532468 320 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNA1P78396 MIR3921-201ENST00000577308 85 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNA1P78396 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNA1P78396 AL671309.1-201ENST00000603750 544 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AC097504.2-201ENST00000608088 454 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AC064859.1-201ENST00000624741 174 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 AC026634.1-201ENST00000634369 198 ntBASIC3.08□□□□□ -1.92
CCNA1P78396 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCNA1P78396 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNA1P78396 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNA1P78396 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 RNU6-582P-201ENST00000362989 107 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 SNORD56.5-201ENST00000364281 72 ntBASIC3.07□□□□□ -1.92
CCNA1P78396 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms