Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 HMGB1P26-201ENST00000452520 628 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA4P78363 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA4P78363 RNU6-711P-201ENST00000517255 106 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AP003385.6-201ENST00000531603 374 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 DNAJC8P1-201ENST00000554535 372 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA4P78363 AC020895.1-201ENST00000595362 272 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AL390240.1-201ENST00000612950 384 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA4P78363 MTND4P35-201ENST00000604257 1375 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA4P78363 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.72□□□□□ -2.13
ABCA4P78363 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ABCA4P78363 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
ABCA4P78363 RNU6-335P-201ENST00000364563 113 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 RNU1-138P-201ENST00000384093 164 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 RPS7P9-201ENST00000414704 586 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA4P78363 RPL23AP63-201ENST00000498752 471 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 SEM1P1-201ENST00000506694 209 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 AC117532.1-201ENST00000514638 323 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.72□□□□□ -2.13
ABCA4P78363 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.72□□□□□ -2.13
ABCA4P78363 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ABCA4P78363 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ABCA4P78363 AL138880.2-201ENST00000616214 239 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 MIR6132-201ENST00000622083 109 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 AC010872.1-201ENST00000624225 675 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 MFSD8-245ENST00000641743 948 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ABCA4P78363 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.72□□□□□ -2.13
ABCA4P78363 AC138915.1-201ENST00000565427 1685 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ABCA4P78363 AC005336.3-201ENST00000623833 2679 ntBASIC1.72□□□□□ -2.13
ABCA4P78363 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
ABCA4P78363 MTCYBP24-201ENST00000420387 1106 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.71□□□□□ -2.13
ABCA4P78363 RFESDP1-201ENST00000422350 461 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 MTATP6P4-201ENST00000427725 675 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.71□□□□□ -2.13
ABCA4P78363 RPS7P2-201ENST00000435134 607 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.71□□□□□ -2.13
ABCA4P78363 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.71□□□□□ -2.13
ABCA4P78363 HMGN2P16-201ENST00000456802 261 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 AC021087.2-201ENST00000504656 1203 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.71□□□□□ -2.13
ABCA4P78363 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.71□□□□□ -2.13
ABCA4P78363 AC011611.5-201ENST00000552477 578 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.71□□□□□ -2.13
ABCA4P78363 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.71□□□□□ -2.13
ABCA4P78363 VN1R7P-201ENST00000619242 903 ntBASIC1.71□□□□□ -2.13
ABCA4P78363 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.71□□□□□ -2.13
ABCA4P78363 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
ABCA4P78363 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.71□□□□□ -2.14
ABCA4P78363 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.71□□□□□ -2.14
ABCA4P78363 AL031663.1-201ENST00000437445 219 ntBASIC1.71□□□□□ -2.14
ABCA4P78363 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.71□□□□□ -2.14
ABCA4P78363 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.71□□□□□ -2.14
ABCA4P78363 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
ABCA4P78363 SNORA31.26-201ENST00000517250 137 ntBASIC1.71□□□□□ -2.14
ABCA4P78363 RPP40P2-201ENST00000603596 712 ntBASIC1.71□□□□□ -2.14
ABCA4P78363 MIR6076-201ENST00000617521 113 ntBASIC1.71□□□□□ -2.14
ABCA4P78363 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
ABCA4P78363 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA4P78363 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA4P78363 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA4P78363 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ABCA4P78363 RNU6-666P-201ENST00000363499 107 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC096533.1-201ENST00000411645 353 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 NUP35P2-201ENST00000416748 943 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 SSXP9-201ENST00000417503 292 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA4P78363 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.7□□□□□ -2.14
ABCA4P78363 MED6P1-201ENST00000439659 713 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 RPL39P40-201ENST00000445481 146 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 NF1P3-201ENST00000457709 450 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 RNA5SP402-201ENST00000517148 110 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA4P78363 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA4P78363 AC104986.1-201ENST00000517978 436 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.7□□□□□ -2.14
ABCA4P78363 MTCYBP41-201ENST00000528913 1123 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.7□□□□□ -2.14
ABCA4P78363 AC060766.3-201ENST00000591442 263 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC008962.1-201ENST00000605729 304 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA4P78363 Y_RNA.540-201ENST00000384638 111 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC109780.2-201ENST00000413467 845 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC005005.2-201ENST00000420779 380 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC027124.2-201ENST00000428249 105 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA4P78363 AP001960.1-201ENST00000506494 658 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 Y_RNA.670-201ENST00000516255 105 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC087373.1-201ENST00000524920 491 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 ARL2BPP2-201ENST00000550907 489 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA4P78363 RPS3AP4-201ENST00000555161 764 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms