Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SNORA69-201ENST00000383895 132 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 U3.20-201ENST00000390909 217 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 MIR1911-201ENST00000410783 80 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 RPS15AP40-201ENST00000419621 391 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 AC092832.1-201ENST00000422934 400 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 UBE2V1P13-201ENST00000436983 439 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 HLA-N-201ENST00000437516 135 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 RPS4XP10-201ENST00000465034 731 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AC055855.1-201ENST00000489563 579 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 RNA5SP401-201ENST00000515920 127 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 RNA5SP337-201ENST00000517007 109 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 HSPE1P5-201ENST00000561489 272 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 MIR3146-201ENST00000580367 79 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AC011712.1-201ENST00000588959 234 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AC005261.5-201ENST00000596280 355 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.83□□□□□ -1.64
HERVK_113P62684 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 AL596245.1-201ENST00000618994 362 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 MIR6500-201ENST00000622700 86 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AC024940.5-201ENST00000622889 474 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AC112204.3-201ENST00000623822 332 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 AL159972.1-201ENST00000625150 448 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HERVK_113P62684 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
HERVK_113P62684 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
HERVK_113P62684 AC068254.2-201ENST00000623938 3577 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
HERVK_113P62684 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 AL592182.3-201ENST00000642132 3304 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERVK_113P62684 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.82□□□□□ -1.64
HERVK_113P62684 RNU6-223P-201ENST00000362830 107 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 RNU6-1158P-201ENST00000391167 107 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 RNU2-15P-201ENST00000410692 191 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AC018644.1-201ENST00000429934 551 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC127537.2-201ENST00000439258 465 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC108734.1-201ENST00000439549 399 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 RPS15AP9-201ENST00000439856 381 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.82□□□□□ -1.64
HERVK_113P62684 RPL23AP2-201ENST00000471227 466 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AC016065.2-201ENST00000514530 444 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.82□□□□□ -1.64
HERVK_113P62684 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 OR4R1P-201ENST00000529879 463 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC069240.1-201ENST00000548774 375 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AL138976.2-201ENST00000563989 694 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 MIR5685-201ENST00000579080 79 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.82□□□□□ -1.64
HERVK_113P62684 UBE2L4-201ENST00000587688 464 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC098848.2-201ENST00000588023 330 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.82□□□□□ -1.64
HERVK_113P62684 AC006504.8-201ENST00000621046 635 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AL136221.1-201ENST00000621449 509 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AL158801.5-201ENST00000623123 465 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 AC112487.2-201ENST00000637950 304 ntBASIC4.82□□□□□ -1.64
HERVK_113P62684 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HERVK_113P62684 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HERVK_113P62684 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HERVK_113P62684 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.81□□□□□ -1.64
HERVK_113P62684 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HERVK_113P62684 AC011460.1-201ENST00000636268 1834 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 MAPK10-320ENST00000641462 6696 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HERVK_113P62684 SNORA71.3-201ENST00000362582 128 ntBASIC4.81□□□□□ -1.64
HERVK_113P62684 SNORA70.4-201ENST00000365509 134 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms