Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LSM3P62310 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LSM3P62310 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.77□□□□□ -2.13
LSM3P62310 AP005205.1-201ENST00000563503 508 ntBASIC1.77□□□□□ -2.13
LSM3P62310 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.77□□□□□ -2.13
LSM3P62310 AC009090.3-201ENST00000616553 565 ntBASIC1.77□□□□□ -2.13
LSM3P62310 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
LSM3P62310 UCA1.1-201ENST00000620952 75 ntBASIC1.77□□□□□ -2.13
LSM3P62310 AL353748.2-201ENST00000622148 471 ntBASIC1.77□□□□□ -2.13
LSM3P62310 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LSM3P62310 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LSM3P62310 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.77□□□□□ -2.13
LSM3P62310 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LSM3P62310 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.76□□□□□ -2.13
LSM3P62310 RNU5D-1-201ENST00000363299 116 ntBASIC1.76□□□□□ -2.13
LSM3P62310 U3.20-201ENST00000390909 217 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AL513475.1-201ENST00000406602 315 ntBASIC1.76□□□□□ -2.13
LSM3P62310 RNU4-72P-201ENST00000410754 173 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AL139156.1-201ENST00000412785 841 ntBASIC1.76□□□□□ -2.13
LSM3P62310 RPS15AP38-201ENST00000413110 372 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC009963.1-201ENST00000417265 157 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.76□□□□□ -2.13
LSM3P62310 TMEM167AP1-201ENST00000423409 219 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM3P62310 AL121871.1-201ENST00000443413 436 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC233279.1-201ENST00000455300 423 ntBASIC1.76□□□□□ -2.13
LSM3P62310 RPS3P1-201ENST00000456781 192 ntBASIC1.76□□□□□ -2.13
LSM3P62310 RPL7P49-201ENST00000471402 708 ntBASIC1.76□□□□□ -2.13
LSM3P62310 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.76□□□□□ -2.13
LSM3P62310 RPL31P41-201ENST00000477967 372 ntBASIC1.76□□□□□ -2.13
LSM3P62310 SUMO1P1-201ENST00000497904 306 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.76□□□□□ -2.13
LSM3P62310 AC026801.2-201ENST00000515352 425 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.76□□□□□ -2.13
LSM3P62310 C1DP5-201ENST00000525775 383 ntBASIC1.76□□□□□ -2.13
LSM3P62310 GLYCAM1-201ENST00000546596 285 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AGGF1P5-201ENST00000567900 919 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.76□□□□□ -2.13
LSM3P62310 MIR3117-201ENST00000584034 78 ntBASIC1.76□□□□□ -2.13
LSM3P62310 VN1R92P-201ENST00000598511 928 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AL020997.2-201ENST00000602607 184 ntBASIC1.76□□□□□ -2.13
LSM3P62310 SRGNP1-201ENST00000603392 451 ntBASIC1.76□□□□□ -2.13
LSM3P62310 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LSM3P62310 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.76□□□□□ -2.13
LSM3P62310 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM3P62310 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM3P62310 AL356118.1-201ENST00000635272 1078 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM3P62310 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.76□□□□□ -2.13
LSM3P62310 U6.107-201ENST00000637108 79 ntBASIC1.76□□□□□ -2.13
LSM3P62310 MTND2P41-201ENST00000637599 773 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC009902.3-201ENST00000606235 2172 ntBASIC1.76□□□□□ -2.13
LSM3P62310 AC004944.1-201ENST00000517807 3059 ntBASIC1.76□□□□□ -2.13
LSM3P62310 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM3P62310 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.75□□□□□ -2.13
LSM3P62310 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.75□□□□□ -2.13
LSM3P62310 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
LSM3P62310 AL354685.2-201ENST00000448218 1447 ntBASIC1.75□□□□□ -2.13
LSM3P62310 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
LSM3P62310 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.75□□□□□ -2.13
LSM3P62310 AL359851.1-201ENST00000569460 4997 ntBASIC1.75□□□□□ -2.13
LSM3P62310 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM3P62310 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LSM3P62310 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
LSM3P62310 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LSM3P62310 OR6K5P-201ENST00000447050 945 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AC104978.1-201ENST00000449387 391 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.75□□□□□ -2.13
LSM3P62310 RPS27P21-201ENST00000486977 252 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AC008885.2-201ENST00000509506 930 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.75□□□□□ -2.13
LSM3P62310 CASP1P1-201ENST00000526345 212 ntBASIC1.75□□□□□ -2.13
LSM3P62310 FAM92A1P1-201ENST00000528023 890 ntBASIC1.75□□□□□ -2.13
LSM3P62310 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM3P62310 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.75□□□□□ -2.13
LSM3P62310 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM3P62310 AL138976.2-201ENST00000563989 694 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM3P62310 MIR5089-201ENST00000580047 84 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AC120053.1-201ENST00000607706 736 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AP001521.1-201ENST00000609150 300 ntBASIC1.75□□□□□ -2.13
LSM3P62310 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM3P62310 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LSM3P62310 Y_RNA.783-201ENST00000613546 102 ntBASIC1.75□□□□□ -2.13
LSM3P62310 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.75□□□□□ -2.13
LSM3P62310 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.75□□□□□ -2.13
LSM3P62310 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.74□□□□□ -2.13
LSM3P62310 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LSM3P62310 MTND4P35-201ENST00000604257 1375 ntBASIC1.74□□□□□ -2.13
LSM3P62310 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.74□□□□□ -2.13
LSM3P62310 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
LSM3P62310 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LSM3P62310 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.74□□□□□ -2.13
LSM3P62310 RNU6-198P-201ENST00000384258 104 ntBASIC1.74□□□□□ -2.13
LSM3P62310 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LSM3P62310 SNORA11.4-201ENST00000408823 129 ntBASIC1.74□□□□□ -2.13
LSM3P62310 RNU2-20P-201ENST00000410425 191 ntBASIC1.74□□□□□ -2.13
LSM3P62310 EIF1AXP1-201ENST00000419267 435 ntBASIC1.74□□□□□ -2.13
LSM3P62310 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms