Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 EXOC5P1-201ENST00000510543 1969 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.11□□□□□ -1.75
CLRN1P58418 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 AL590240.1-201ENST00000334118 313 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 FRG1CP-201ENST00000358464 769 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 SNORD115-7-201ENST00000365306 82 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RNU6-831P-201ENST00000384548 107 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AL583835.1-201ENST00000399570 407 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 MIR921-201ENST00000401133 56 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 MIR298-201ENST00000401212 88 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RNU6-712P-201ENST00000410558 100 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.11□□□□□ -1.75
CLRN1P58418 BX323014.1-201ENST00000412876 237 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 Z74021.1-201ENST00000423610 407 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RPL7L1P10-201ENST00000427790 463 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AC016712.1-201ENST00000431088 378 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.11□□□□□ -1.75
CLRN1P58418 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.11□□□□□ -1.75
CLRN1P58418 HMGB3P9-201ENST00000441799 583 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AL162389.1-201ENST00000449233 177 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 SNRPFP3-201ENST00000457792 225 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AC079804.1-201ENST00000461922 436 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AC008481.1-201ENST00000463278 396 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RPS27AP1-201ENST00000475545 471 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AC083982.1-201ENST00000485679 344 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RPL36AP41-201ENST00000493820 306 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.11□□□□□ -1.75
CLRN1P58418 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.11□□□□□ -1.75
CLRN1P58418 AC026801.2-201ENST00000515352 425 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 SNORA19.2-201ENST00000516013 114 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RNU6-1038P-201ENST00000516516 104 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RN7SKP256-201ENST00000517201 314 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.11□□□□□ -1.75
CLRN1P58418 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.11□□□□□ -1.75
CLRN1P58418 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.11□□□□□ -1.75
CLRN1P58418 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.11□□□□□ -1.75
CLRN1P58418 AC005498.1-201ENST00000592125 465 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 AL034351.1-201ENST00000605288 668 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 SNORD91B-202ENST00000608459 222 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 SNHG22-203ENST00000617833 660 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 uc_338.11-201ENST00000619132 160 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 C2orf27A-204ENST00000623058 969 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AC243312.2-201ENST00000623340 601 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.11□□□□□ -1.75
CLRN1P58418 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLRN1P58418 DDX10P1-201ENST00000448545 1933 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 ZNF137P-201ENST00000456718 1920 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 MAPK10-304ENST00000641341 3984 ntBASIC4.11□□□□□ -1.75
CLRN1P58418 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.11□□□□□ -1.75
CLRN1P58418 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN1P58418 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.1□□□□□ -1.75
CLRN1P58418 AC093535.2-201ENST00000624769 2326 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.1□□□□□ -1.75
CLRN1P58418 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN1P58418 Y_RNA.100-201ENST00000363141 102 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 RNU6-522P-201ENST00000364497 107 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 Y_RNA.419-201ENST00000384041 102 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 Y_RNA.576-201ENST00000384781 102 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLRN1P58418 SOD2P1-201ENST00000396543 562 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 EIF4A1P3-201ENST00000411521 244 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN1P58418 RPS7P15-201ENST00000415804 584 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN1P58418 RAC1P6-201ENST00000423911 575 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 RPL23AP25-201ENST00000430973 463 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 HMGB1P18-201ENST00000438801 619 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 GAPDHP27-201ENST00000447427 1020 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AL121877.1-201ENST00000453704 622 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 PPP1R2P5-201ENST00000457256 603 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 RN7SL610P-201ENST00000463845 291 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 RPL23AP11-201ENST00000475260 469 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 RPL21P103-201ENST00000479921 488 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AC093270.2-201ENST00000486157 792 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN1P58418 MYL12AP1-201ENST00000518490 515 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN1P58418 DEFB109D-201ENST00000529497 240 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.1□□□□□ -1.75
CLRN1P58418 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.1□□□□□ -1.75
CLRN1P58418 AC126177.3-201ENST00000551839 688 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AL118558.2-201ENST00000556294 238 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms