Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SUB1P1-201ENST00000524415 382 ntBASIC4.3□□□□□ -1.72
PER3P56645 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.3□□□□□ -1.72
PER3P56645 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.3□□□□□ -1.72
PER3P56645 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.3□□□□□ -1.72
PER3P56645 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.3□□□□□ -1.72
PER3P56645 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.3□□□□□ -1.72
PER3P56645 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.3□□□□□ -1.72
PER3P56645 AC015917.1-201ENST00000579654 510 ntBASIC4.3□□□□□ -1.72
PER3P56645 AC022726.1-201ENST00000587475 207 ntBASIC4.3□□□□□ -1.72
PER3P56645 AC006254.3-201ENST00000603353 884 ntBASIC4.3□□□□□ -1.72
PER3P56645 AC112230.1-201ENST00000604342 547 ntBASIC4.3□□□□□ -1.72
PER3P56645 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
PER3P56645 AC011944.2-201ENST00000624440 683 ntBASIC4.3□□□□□ -1.72
PER3P56645 OR52H1-202ENST00000641796 1061 ntBASIC4.3□□□□□ -1.72
PER3P56645 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PER3P56645 MTCO1P9-201ENST00000505577 1534 ntBASIC4.3□□□□□ -1.72
PER3P56645 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PER3P56645 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PER3P56645 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PER3P56645 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PER3P56645 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PER3P56645 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.29□□□□□ -1.72
PER3P56645 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.29□□□□□ -1.72
PER3P56645 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.29□□□□□ -1.72
PER3P56645 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PER3P56645 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PER3P56645 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PER3P56645 MIR448-201ENST00000362131 111 ntBASIC4.29□□□□□ -1.72
PER3P56645 MIR454-201ENST00000390180 115 ntBASIC4.29□□□□□ -1.72
PER3P56645 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PER3P56645 RNU6-1009P-201ENST00000390996 107 ntBASIC4.29□□□□□ -1.72
PER3P56645 AL583834.1-201ENST00000406943 343 ntBASIC4.29□□□□□ -1.72
PER3P56645 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.29□□□□□ -1.72
PER3P56645 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PER3P56645 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.29□□□□□ -1.72
PER3P56645 PDSS1P1-201ENST00000422953 1114 ntBASIC4.29□□□□□ -1.72
PER3P56645 AC018630.2-202ENST00000422992 927 ntBASIC4.29□□□□□ -1.72
PER3P56645 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.29□□□□□ -1.72
PER3P56645 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.29□□□□□ -1.72
PER3P56645 RPL35AP22-201ENST00000436855 335 ntBASIC4.29□□□□□ -1.72
PER3P56645 UBE2V1P7-201ENST00000446395 340 ntBASIC4.29□□□□□ -1.72
PER3P56645 AC000111.2-201ENST00000448200 210 ntBASIC4.29□□□□□ -1.72
PER3P56645 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.29□□□□□ -1.72
PER3P56645 RPL36AP13-201ENST00000457490 317 ntBASIC4.29□□□□□ -1.72
PER3P56645 GMFBP1-201ENST00000467831 427 ntBASIC4.29□□□□□ -1.72
PER3P56645 AL163973.1-201ENST00000484753 577 ntBASIC4.29□□□□□ -1.72
PER3P56645 RPS15AP36-201ENST00000492022 382 ntBASIC4.29□□□□□ -1.72
PER3P56645 NIPA2P2-201ENST00000496376 1083 ntBASIC4.29□□□□□ -1.72
PER3P56645 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.29□□□□□ -1.72
PER3P56645 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.29□□□□□ -1.72
PER3P56645 AC026427.2-201ENST00000506228 536 ntBASIC4.29□□□□□ -1.72
PER3P56645 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.29□□□□□ -1.72
PER3P56645 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.29□□□□□ -1.72
PER3P56645 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.29□□□□□ -1.72
PER3P56645 AL138976.2-201ENST00000563989 694 ntBASIC4.29□□□□□ -1.72
PER3P56645 AC010525.2-201ENST00000590920 195 ntBASIC4.29□□□□□ -1.72
PER3P56645 VN1R85P-201ENST00000601587 426 ntBASIC4.29□□□□□ -1.72
PER3P56645 AC010591.1-201ENST00000603941 649 ntBASIC4.29□□□□□ -1.72
PER3P56645 TUG1_1.1-201ENST00000610654 145 ntBASIC4.29□□□□□ -1.72
PER3P56645 RIOK3P1-201ENST00000418778 1528 ntBASIC4.29□□□□□ -1.72
PER3P56645 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.29□□□□□ -1.72
PER3P56645 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.29□□□□□ -1.72
PER3P56645 AL645937.1-201ENST00000641739 1652 ntBASIC4.29□□□□□ -1.72
PER3P56645 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PER3P56645 AC090229.1-201ENST00000590983 1609 ntBASIC4.28□□□□□ -1.72
PER3P56645 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PER3P56645 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PER3P56645 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PER3P56645 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PER3P56645 RNU6-1155P-201ENST00000363554 107 ntBASIC4.28□□□□□ -1.72
PER3P56645 RNA5SP509-201ENST00000364577 119 ntBASIC4.28□□□□□ -1.72
PER3P56645 RNU5E-6P-201ENST00000365574 115 ntBASIC4.28□□□□□ -1.72
PER3P56645 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PER3P56645 RNU6-356P-201ENST00000384140 107 ntBASIC4.28□□□□□ -1.72
PER3P56645 U3.30-201ENST00000391308 210 ntBASIC4.28□□□□□ -1.72
PER3P56645 AL109755.1-201ENST00000401791 649 ntBASIC4.28□□□□□ -1.72
PER3P56645 Z98745.1-201ENST00000402553 494 ntBASIC4.28□□□□□ -1.72
PER3P56645 AL136372.1-201ENST00000403060 228 ntBASIC4.28□□□□□ -1.72
PER3P56645 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.28□□□□□ -1.72
PER3P56645 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.28□□□□□ -1.72
PER3P56645 AL513185.2-201ENST00000425543 193 ntBASIC4.28□□□□□ -1.72
PER3P56645 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.28□□□□□ -1.72
PER3P56645 RPS17P8-201ENST00000434525 335 ntBASIC4.28□□□□□ -1.72
PER3P56645 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.28□□□□□ -1.72
PER3P56645 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.28□□□□□ -1.72
PER3P56645 EIF4EP3-201ENST00000498782 656 ntBASIC4.28□□□□□ -1.72
PER3P56645 AC007016.1-201ENST00000512110 244 ntBASIC4.28□□□□□ -1.72
PER3P56645 LRRC34P2-201ENST00000514850 553 ntBASIC4.28□□□□□ -1.72
PER3P56645 RNU7-51P-201ENST00000516560 62 ntBASIC4.28□□□□□ -1.72
PER3P56645 SNORD60.2-201ENST00000516883 86 ntBASIC4.28□□□□□ -1.72
PER3P56645 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.28□□□□□ -1.72
PER3P56645 SUMO2P20-201ENST00000520803 283 ntBASIC4.28□□□□□ -1.72
PER3P56645 PSMA2P1-201ENST00000526365 646 ntBASIC4.28□□□□□ -1.72
PER3P56645 AP005435.4-201ENST00000529514 284 ntBASIC4.28□□□□□ -1.72
PER3P56645 AC123904.3-201ENST00000547218 814 ntBASIC4.28□□□□□ -1.72
PER3P56645 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.28□□□□□ -1.72
PER3P56645 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.28□□□□□ -1.72
PER3P56645 MIR4775-201ENST00000581168 75 ntBASIC4.28□□□□□ -1.72
PER3P56645 MIR3939-201ENST00000582614 106 ntBASIC4.28□□□□□ -1.72
PER3P56645 AC018638.8-201ENST00000588755 281 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms