Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GFRA1P56159 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
GFRA1P56159 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 AC009812.4-201ENST00000569134 1805 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
GFRA1P56159 RPL32P3-201ENST00000359025 275 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 RN7SKP44-201ENST00000363602 316 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 SNORD116-11-201ENST00000383882 92 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 RNU6-14P-201ENST00000384630 106 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 MIR559-201ENST00000385188 96 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AL360182.1-201ENST00000397433 468 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC097374.1-203ENST00000400783 485 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 MIR937-201ENST00000401271 86 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 OR2AM1P-201ENST00000422137 422 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 MTND2P23-201ENST00000422990 651 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 SNAP23P1-201ENST00000433229 246 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 FABP5P14-201ENST00000437273 393 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AF228730.2-201ENST00000438784 848 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 RPL26P6-201ENST00000440913 438 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 Y_RNA.631-201ENST00000459607 101 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC130509.1-201ENST00000464158 433 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 RN7SL319P-201ENST00000480656 221 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 AC005741.1-201ENST00000511094 432 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 SNORA31.3-201ENST00000516029 96 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 RNU2-69P-201ENST00000516061 100 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 SNORA14.1-201ENST00000516113 141 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 RNU6-327P-201ENST00000516270 127 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 RNU6-1045P-201ENST00000516321 107 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 RNA5SP230-201ENST00000517039 122 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 TRMT10BP1-201ENST00000519377 943 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC090151.1-201ENST00000520784 730 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC012339.2-201ENST00000523996 453 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AP004371.1-201ENST00000525240 214 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.52□□□□□ -1.69
GFRA1P56159 AL163153.1-201ENST00000554223 283 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AL355836.1-201ENST00000555951 870 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA1P56159 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA1P56159 AL049539.1-201ENST00000611964 459 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA1P56159 AC087385.3-201ENST00000620477 187 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA1P56159 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 SCARNA15-201ENST00000607520 4325 ntBASIC4.52□□□□□ -1.69
GFRA1P56159 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
GFRA1P56159 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
GFRA1P56159 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.52□□□□□ -1.69
GFRA1P56159 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA1P56159 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 Y_RNA.132-201ENST00000363421 102 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 RNA5SP235-201ENST00000365411 114 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 HSPE1P8-201ENST00000406997 288 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 U3.32-201ENST00000408116 212 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 VDAC1P9-201ENST00000412766 841 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 COX5BP7-201ENST00000414780 274 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.51□□□□□ -1.69
GFRA1P56159 AL160275.3-201ENST00000423876 471 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 AL450023.3-201ENST00000440592 271 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.51□□□□□ -1.69
GFRA1P56159 AC008264.1-201ENST00000447612 367 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 MTND1P17-201ENST00000448961 204 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms