Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.49□□□□□ -1.69
ATXN1P54253 AL033528.1-201ENST00000453780 140 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 TRBV26-201ENST00000456572 344 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AC026410.2-201ENST00000460281 156 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 TMEM251P1-201ENST00000503717 318 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.49□□□□□ -1.69
ATXN1P54253 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATXN1P54253 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.49□□□□□ -1.69
ATXN1P54253 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.49□□□□□ -1.69
ATXN1P54253 AC104136.1-201ENST00000512969 394 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 IGKV2D-36-201ENST00000518643 226 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 DEFB108A-201ENST00000530110 222 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AC100770.1-201ENST00000532310 322 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.49□□□□□ -1.69
ATXN1P54253 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.49□□□□□ -1.69
ATXN1P54253 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.49□□□□□ -1.69
ATXN1P54253 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.49□□□□□ -1.69
ATXN1P54253 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.49□□□□□ -1.69
ATXN1P54253 AC025588.3-201ENST00000604182 274 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AL132822.1-201ENST00000617063 513 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AL139089.1-201ENST00000620372 975 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AC140479.6-201ENST00000633535 357 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AC008013.2-202ENST00000637965 364 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 AC119674.1-207ENST00000641355 633 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
ATXN1P54253 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATXN1P54253 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
ATXN1P54253 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATXN1P54253 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.49□□□□□ -1.69
ATXN1P54253 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
ATXN1P54253 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.48□□□□□ -1.69
ATXN1P54253 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATXN1P54253 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATXN1P54253 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
ATXN1P54253 RNU6-289P-201ENST00000364093 107 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 RNA5SP175-201ENST00000364275 119 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 Y_RNA.453-201ENST00000384223 109 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 Y_RNA.548-201ENST00000384656 105 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 EIF5P1-201ENST00000400019 1231 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 RNA5SP36-201ENST00000410197 133 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 RPL21P111-201ENST00000418453 477 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.48□□□□□ -1.69
ATXN1P54253 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.48□□□□□ -1.69
ATXN1P54253 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 AL022238.1-201ENST00000442557 355 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC244505.5-201ENST00000443639 207 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC104073.1-201ENST00000451988 151 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.48□□□□□ -1.69
ATXN1P54253 AC013267.1-201ENST00000458227 267 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 RN7SL812P-201ENST00000493791 279 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 RN7SL691P-201ENST00000494487 301 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATXN1P54253 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.48□□□□□ -1.69
ATXN1P54253 RNU6-358P-201ENST00000516564 75 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.48□□□□□ -1.69
ATXN1P54253 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.48□□□□□ -1.69
ATXN1P54253 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.48□□□□□ -1.69
ATXN1P54253 AL121821.2-201ENST00000556081 394 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC110588.1-201ENST00000559699 137 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 MIR5697-201ENST00000578045 78 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.48□□□□□ -1.69
ATXN1P54253 MIR544B-201ENST00000582372 78 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 AC053481.4-201ENST00000583164 216 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.48□□□□□ -1.69
ATXN1P54253 AC098614.4-201ENST00000607601 462 ntBASIC4.48□□□□□ -1.69
ATXN1P54253 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATXN1P54253 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
ATXN1P54253 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.48□□□□□ -1.69
ATXN1P54253 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATXN1P54253 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.48□□□□□ -1.69
ATXN1P54253 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.47□□□□□ -1.69
ATXN1P54253 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
ATXN1P54253 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATXN1P54253 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATXN1P54253 AC006378.2-201ENST00000623178 2476 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATXN1P54253 Y_RNA.146-201ENST00000363549 102 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 RNU6-1090P-201ENST00000364065 94 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATXN1P54253 RNU5A-6P-201ENST00000384136 116 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 RNU6-297P-201ENST00000384636 107 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 RNU6-780P-201ENST00000391030 104 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 RNU2-3P-201ENST00000410144 191 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 RN7SKP266-201ENST00000410232 287 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 Y_RNA.605-201ENST00000410577 105 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATXN1P54253 AL356095.1-201ENST00000417217 199 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms