Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SCARNA15.2-201ENST00000516409 127 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC107934.1-201ENST00000522215 217 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC011979.2-201ENST00000527568 352 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AP003122.4-201ENST00000530980 758 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC063950.1-201ENST00000552036 308 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.21□□□□□ -1.74
NEK3P51956 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.21□□□□□ -1.74
NEK3P51956 AC022655.2-201ENST00000577280 318 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.21□□□□□ -1.74
NEK3P51956 RSL24D1P11-201ENST00000591045 491 ntBASIC4.21□□□□□ -1.74
NEK3P51956 DUXAP4-201ENST00000603046 613 ntBASIC4.21□□□□□ -1.74
NEK3P51956 SEPT7P9-203ENST00000604116 343 ntBASIC4.21□□□□□ -1.74
NEK3P51956 RNU4-89P-201ENST00000607443 133 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC108747.1-201ENST00000609508 535 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC011939.3-201ENST00000613686 466 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC008250.2-201ENST00000615261 205 ntBASIC4.21□□□□□ -1.74
NEK3P51956 RNA5SP196-201ENST00000625967 102 ntBASIC4.21□□□□□ -1.74
NEK3P51956 PISRT1-201ENST00000626175 531 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC066616.2-201ENST00000559334 1481 ntBASIC4.21□□□□□ -1.74
NEK3P51956 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.21□□□□□ -1.74
NEK3P51956 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NEK3P51956 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEK3P51956 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NEK3P51956 GNG5P1-201ENST00000255500 204 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RNA5SP322-201ENST00000363617 119 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RNA5SP130-201ENST00000364431 114 ntBASIC4.2□□□□□ -1.74
NEK3P51956 SNORD6-201ENST00000365444 73 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AP000567.1-201ENST00000406413 156 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RNU6-628P-201ENST00000410675 107 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RNU6-248P-201ENST00000410720 107 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RNA5SP107-201ENST00000411358 122 ntBASIC4.2□□□□□ -1.74
NEK3P51956 MORF4L1P6-201ENST00000418771 268 ntBASIC4.2□□□□□ -1.74
NEK3P51956 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.2□□□□□ -1.74
NEK3P51956 RPL17P36-201ENST00000420302 549 ntBASIC4.2□□□□□ -1.74
NEK3P51956 MTCO2P34-201ENST00000421994 607 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.2□□□□□ -1.74
NEK3P51956 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK3P51956 RABEPKP1-201ENST00000440529 1026 ntBASIC4.2□□□□□ -1.74
NEK3P51956 USP9YP29-201ENST00000445112 563 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.2□□□□□ -1.74
NEK3P51956 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK3P51956 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AL049714.1-201ENST00000466686 347 ntBASIC4.2□□□□□ -1.74
NEK3P51956 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NEK3P51956 AL132838.2-201ENST00000492041 314 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AC106872.2-201ENST00000494303 480 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RPL31P61-201ENST00000496160 376 ntBASIC4.2□□□□□ -1.74
NEK3P51956 MIR2114-201ENST00000516645 80 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RNU6-64P-201ENST00000517119 105 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK3P51956 RPL12P22-201ENST00000519073 490 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.2□□□□□ -1.74
NEK3P51956 AP002963.1-201ENST00000530590 184 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.2□□□□□ -1.74
NEK3P51956 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.2□□□□□ -1.74
NEK3P51956 AC135279.1-201ENST00000543493 504 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.2□□□□□ -1.74
NEK3P51956 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK3P51956 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.2□□□□□ -1.74
NEK3P51956 AL355836.1-201ENST00000555951 870 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK3P51956 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK3P51956 HMGN1P30-201ENST00000589286 268 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AC119751.7-201ENST00000600494 245 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AC106900.2-201ENST00000604994 317 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AL451064.1-201ENST00000607718 471 ntBASIC4.2□□□□□ -1.74
NEK3P51956 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.2□□□□□ -1.74
NEK3P51956 AP000254.1-201ENST00000609934 520 ntBASIC4.2□□□□□ -1.74
NEK3P51956 MIR6867-201ENST00000610636 67 ntBASIC4.2□□□□□ -1.74
NEK3P51956 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.2□□□□□ -1.74
NEK3P51956 SDR42E1P2-201ENST00000614861 481 ntBASIC4.2□□□□□ -1.74
NEK3P51956 FRG1KP-201ENST00000623592 341 ntBASIC4.2□□□□□ -1.74
NEK3P51956 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.2□□□□□ -1.74
NEK3P51956 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NEK3P51956 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.2□□□□□ -1.74
NEK3P51956 EXOC5P1-201ENST00000510543 1969 ntBASIC4.2□□□□□ -1.74
NEK3P51956 AP001486.2-201ENST00000561652 5113 ntBASIC4.19□□□□□ -1.74
NEK3P51956 RNA5SP295-201ENST00000362655 121 ntBASIC4.19□□□□□ -1.74
NEK3P51956 RPL23AP32-201ENST00000395315 459 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.19□□□□□ -1.74
NEK3P51956 AC007899.1-201ENST00000412776 775 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.19□□□□□ -1.74
NEK3P51956 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.19□□□□□ -1.74
NEK3P51956 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.19□□□□□ -1.74
NEK3P51956 AF228730.2-201ENST00000438784 848 ntBASIC4.19□□□□□ -1.74
NEK3P51956 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.19□□□□□ -1.74
NEK3P51956 MTCO1P19-201ENST00000443487 500 ntBASIC4.19□□□□□ -1.74
NEK3P51956 RPS20P20-201ENST00000460498 340 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.19□□□□□ -1.74
NEK3P51956 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.19□□□□□ -1.74
NEK3P51956 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.19□□□□□ -1.74
NEK3P51956 IGKV2-38-201ENST00000517443 247 ntBASIC4.19□□□□□ -1.74
NEK3P51956 OR8R1P-201ENST00000543943 764 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC123904.3-201ENST00000547218 814 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC093012.1-202ENST00000549403 582 ntBASIC4.19□□□□□ -1.74
NEK3P51956 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms