Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPL28P46779 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPL28P46779 RNA5SP374-201ENST00000362939 125 ntBASIC1.78□□□□□ -2.12
RPL28P46779 RNA5SP393-201ENST00000363423 117 ntBASIC1.78□□□□□ -2.12
RPL28P46779 RNU6-792P-201ENST00000363490 107 ntBASIC1.78□□□□□ -2.12
RPL28P46779 UBE2V1P15-201ENST00000407776 448 ntBASIC1.78□□□□□ -2.12
RPL28P46779 RNU6-193P-201ENST00000410977 107 ntBASIC1.78□□□□□ -2.12
RPL28P46779 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL28P46779 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.78□□□□□ -2.12
RPL28P46779 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RPL28P46779 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL28P46779 WASF1P1-201ENST00000447560 1131 ntBASIC1.78□□□□□ -2.12
RPL28P46779 MTCO1P48-201ENST00000448024 1096 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AL096803.2-201ENST00000450032 677 ntBASIC1.78□□□□□ -2.12
RPL28P46779 MTND2P3-201ENST00000452458 470 ntBASIC1.78□□□□□ -2.12
RPL28P46779 snoU13.28-201ENST00000459235 104 ntBASIC1.78□□□□□ -2.12
RPL28P46779 RNU7-140P-201ENST00000459546 60 ntBASIC1.78□□□□□ -2.12
RPL28P46779 RPL23AP70-201ENST00000483361 460 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL28P46779 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL28P46779 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.78□□□□□ -2.12
RPL28P46779 RNA5SP341-201ENST00000516261 117 ntBASIC1.78□□□□□ -2.12
RPL28P46779 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL28P46779 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL28P46779 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.78□□□□□ -2.12
RPL28P46779 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL28P46779 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.78□□□□□ -2.12
RPL28P46779 AC008127.2-201ENST00000549925 1075 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AC090888.1-201ENST00000561335 1141 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AC103810.1-201ENST00000579873 453 ntBASIC1.78□□□□□ -2.12
RPL28P46779 ZNF92P2-201ENST00000600543 1059 ntBASIC1.78□□□□□ -2.12
RPL28P46779 RPL23AP92-201ENST00000603609 255 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL28P46779 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPL28P46779 AC034102.8-201ENST00000615146 484 ntBASIC1.78□□□□□ -2.12
RPL28P46779 VN1R7P-201ENST00000619242 903 ntBASIC1.78□□□□□ -2.12
RPL28P46779 MIR8057-201ENST00000620957 69 ntBASIC1.78□□□□□ -2.12
RPL28P46779 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPL28P46779 MIR3651-201ENST00000630427 90 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AC026634.1-201ENST00000634369 198 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AL590396.4-201ENST00000636779 956 ntBASIC1.78□□□□□ -2.12
RPL28P46779 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
RPL28P46779 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
RPL28P46779 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.78□□□□□ -2.12
RPL28P46779 CR848007.1-201ENST00000442354 1699 ntBASIC1.77□□□□□ -2.13
RPL28P46779 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RPL28P46779 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL28P46779 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.77□□□□□ -2.13
RPL28P46779 NACA3P-201ENST00000359690 648 ntBASIC1.77□□□□□ -2.13
RPL28P46779 RNU6-839P-201ENST00000363347 108 ntBASIC1.77□□□□□ -2.13
RPL28P46779 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPL28P46779 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPL28P46779 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
RPL28P46779 RNU6-878P-201ENST00000384578 110 ntBASIC1.77□□□□□ -2.13
RPL28P46779 MIR1290-201ENST00000408735 78 ntBASIC1.77□□□□□ -2.13
RPL28P46779 RNU2-47P-201ENST00000410649 186 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AL136133.1-201ENST00000413694 376 ntBASIC1.77□□□□□ -2.13
RPL28P46779 SFR1P2-201ENST00000421841 730 ntBASIC1.77□□□□□ -2.13
RPL28P46779 RAC1P8-201ENST00000427086 527 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AL512637.2-201ENST00000431287 1256 ntBASIC1.77□□□□□ -2.13
RPL28P46779 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AC234064.1-201ENST00000436312 247 ntBASIC1.77□□□□□ -2.13
RPL28P46779 ARPC3P1-201ENST00000437218 533 ntBASIC1.77□□□□□ -2.13
RPL28P46779 RPS15AP7-201ENST00000439294 405 ntBASIC1.77□□□□□ -2.13
RPL28P46779 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.77□□□□□ -2.13
RPL28P46779 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL28P46779 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AL671855.1-201ENST00000446875 1203 ntBASIC1.77□□□□□ -2.13
RPL28P46779 OR51B8P-201ENST00000449892 769 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 NIPA2P5-201ENST00000452282 464 ntBASIC1.77□□□□□ -2.13
RPL28P46779 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL28P46779 RNU6-420P-201ENST00000458780 107 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AL049714.1-201ENST00000466686 347 ntBASIC1.77□□□□□ -2.13
RPL28P46779 RPL31P41-201ENST00000477967 372 ntBASIC1.77□□□□□ -2.13
RPL28P46779 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.77□□□□□ -2.13
RPL28P46779 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AC026427.2-201ENST00000506228 536 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AC010468.3-201ENST00000508225 458 ntBASIC1.77□□□□□ -2.13
RPL28P46779 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.77□□□□□ -2.13
RPL28P46779 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.77□□□□□ -2.13
RPL28P46779 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AP001317.1-201ENST00000531194 960 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AC123904.3-201ENST00000547218 814 ntBASIC1.77□□□□□ -2.13
RPL28P46779 CR383656.7-201ENST00000548164 174 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AC011611.5-201ENST00000552477 578 ntBASIC1.77□□□□□ -2.13
RPL28P46779 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.77□□□□□ -2.13
RPL28P46779 MIR4325-201ENST00000583049 90 ntBASIC1.77□□□□□ -2.13
RPL28P46779 MIR5092-201ENST00000583139 88 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.77□□□□□ -2.13
RPL28P46779 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL28P46779 AL137847.3-201ENST00000611521 109 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AC245517.5-201ENST00000611529 162 ntBASIC1.77□□□□□ -2.13
RPL28P46779 AC140725.3-201ENST00000616193 880 ntBASIC1.77□□□□□ -2.13
RPL28P46779 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.77□□□□□ -2.13
RPL28P46779 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPL28P46779 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms