Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPS27AP14-201ENST00000422868 454 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AL445584.1-201ENST00000431451 330 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AC090774.1-201ENST00000435925 246 ntBASIC3.69□□□□□ -1.82
HADHAP40939 THAP5P1-201ENST00000439089 262 ntBASIC3.69□□□□□ -1.82
HADHAP40939 FAM103A2P-201ENST00000444122 354 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AL133217.1-201ENST00000450980 425 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AC007967.1-201ENST00000455422 1159 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.69□□□□□ -1.82
HADHAP40939 BZW1P2-201ENST00000473537 826 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 RPF2P2-201ENST00000504693 896 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 AC005178.1-201ENST00000508392 440 ntBASIC3.69□□□□□ -1.82
HADHAP40939 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.69□□□□□ -1.82
HADHAP40939 AL359273.1-201ENST00000510918 627 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.69□□□□□ -1.82
HADHAP40939 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.69□□□□□ -1.82
HADHAP40939 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.69□□□□□ -1.82
HADHAP40939 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.69□□□□□ -1.82
HADHAP40939 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.69□□□□□ -1.82
HADHAP40939 BCRP9-201ENST00000605312 388 ntBASIC3.69□□□□□ -1.82
HADHAP40939 RNU1-30P-201ENST00000606575 163 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AL450472.3-201ENST00000615578 367 ntBASIC3.69□□□□□ -1.82
HADHAP40939 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 AC092628.2-201ENST00000622492 339 ntBASIC3.69□□□□□ -1.82
HADHAP40939 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HADHAP40939 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HADHAP40939 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HADHAP40939 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HADHAP40939 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.68□□□□□ -1.82
HADHAP40939 RNU6-76P-201ENST00000384060 104 ntBASIC3.68□□□□□ -1.82
HADHAP40939 Y_RNA.548-201ENST00000384656 105 ntBASIC3.68□□□□□ -1.82
HADHAP40939 MIR670-201ENST00000390142 98 ntBASIC3.68□□□□□ -1.82
HADHAP40939 AF228730.1-201ENST00000397972 663 ntBASIC3.68□□□□□ -1.82
HADHAP40939 RNU6-516P-201ENST00000411381 104 ntBASIC3.68□□□□□ -1.82
HADHAP40939 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.68□□□□□ -1.82
HADHAP40939 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.68□□□□□ -1.82
HADHAP40939 AL451062.2-201ENST00000427515 271 ntBASIC3.68□□□□□ -1.82
HADHAP40939 NDUFB1P1-201ENST00000435191 180 ntBASIC3.68□□□□□ -1.82
HADHAP40939 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.68□□□□□ -1.82
HADHAP40939 RPS23P3-201ENST00000470993 430 ntBASIC3.68□□□□□ -1.82
HADHAP40939 ARL2BPP6-201ENST00000512757 439 ntBASIC3.68□□□□□ -1.82
HADHAP40939 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.68□□□□□ -1.82
HADHAP40939 RNU6-579P-201ENST00000516879 102 ntBASIC3.68□□□□□ -1.82
HADHAP40939 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.68□□□□□ -1.82
HADHAP40939 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.68□□□□□ -1.82
HADHAP40939 AP001804.3-201ENST00000525146 880 ntBASIC3.68□□□□□ -1.82
HADHAP40939 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HADHAP40939 AC008011.1-201ENST00000545989 227 ntBASIC3.68□□□□□ -1.82
HADHAP40939 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.68□□□□□ -1.82
HADHAP40939 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.68□□□□□ -1.82
HADHAP40939 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.68□□□□□ -1.82
HADHAP40939 AC055876.1-202ENST00000567053 138 ntBASIC3.68□□□□□ -1.82
HADHAP40939 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 SNORA51-201ENST00000606420 132 ntBASIC3.68□□□□□ -1.82
HADHAP40939 AC107214.2-201ENST00000608204 634 ntBASIC3.68□□□□□ -1.82
HADHAP40939 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.68□□□□□ -1.82
HADHAP40939 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 AL732618.1-201ENST00000623251 301 ntBASIC3.68□□□□□ -1.82
HADHAP40939 AC243312.2-201ENST00000623340 601 ntBASIC3.68□□□□□ -1.82
HADHAP40939 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HADHAP40939 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HADHAP40939 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.68□□□□□ -1.82
HADHAP40939 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
HADHAP40939 DDX10P1-201ENST00000448545 1933 ntBASIC3.68□□□□□ -1.82
HADHAP40939 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HADHAP40939 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HADHAP40939 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HADHAP40939 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.67□□□□□ -1.82
HADHAP40939 CR383658.2-201ENST00000547576 1525 ntBASIC3.67□□□□□ -1.82
HADHAP40939 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HADHAP40939 RNU6-660P-201ENST00000364566 109 ntBASIC3.67□□□□□ -1.82
HADHAP40939 RNA5SP171-201ENST00000391071 115 ntBASIC3.67□□□□□ -1.82
HADHAP40939 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HADHAP40939 AC007066.1-201ENST00000392902 381 ntBASIC3.67□□□□□ -1.82
HADHAP40939 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.67□□□□□ -1.82
HADHAP40939 VPS26BP1-201ENST00000417155 755 ntBASIC3.67□□□□□ -1.82
HADHAP40939 YPEL5P1-201ENST00000419731 367 ntBASIC3.67□□□□□ -1.82
HADHAP40939 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.67□□□□□ -1.82
HADHAP40939 PPP1R11P2-201ENST00000423543 382 ntBASIC3.67□□□□□ -1.82
HADHAP40939 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HADHAP40939 OR4K11P-201ENST00000431829 904 ntBASIC3.67□□□□□ -1.82
HADHAP40939 AC109583.1-201ENST00000432156 268 ntBASIC3.67□□□□□ -1.82
HADHAP40939 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms