Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MIR7-2-201ENST00000384970 110 ntBASIC2.54□□□□□ -2
COL18A1P39060 AP1B1P2-201ENST00000416196 106 ntBASIC2.54□□□□□ -2
COL18A1P39060 MTCO3P30-201ENST00000426425 670 ntBASIC2.54□□□□□ -2
COL18A1P39060 RPL7P29-201ENST00000437151 728 ntBASIC2.54□□□□□ -2
COL18A1P39060 AC009237.8-201ENST00000445492 379 ntBASIC2.54□□□□□ -2
COL18A1P39060 HMGN2P21-201ENST00000447764 270 ntBASIC2.54□□□□□ -2
COL18A1P39060 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.54□□□□□ -2
COL18A1P39060 SNRPGP9-201ENST00000456025 225 ntBASIC2.54□□□□□ -2
COL18A1P39060 RPL23AP63-201ENST00000498752 471 ntBASIC2.54□□□□□ -2
COL18A1P39060 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.54□□□□□ -2
COL18A1P39060 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.54□□□□□ -2
COL18A1P39060 SUB1P3-201ENST00000564581 315 ntBASIC2.54□□□□□ -2
COL18A1P39060 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.54□□□□□ -2
COL18A1P39060 CBX3P2-202ENST00000583365 535 ntBASIC2.54□□□□□ -2
COL18A1P39060 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
COL18A1P39060 XIST_intron.1-201ENST00000619444 68 ntBASIC2.54□□□□□ -2
COL18A1P39060 AC084768.2-201ENST00000622736 221 ntBASIC2.54□□□□□ -2
COL18A1P39060 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.54□□□□□ -2
COL18A1P39060 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.54□□□□□ -2
COL18A1P39060 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL18A1P39060 MIR337-201ENST00000362281 93 ntBASIC2.54□□□□□ -2
COL18A1P39060 RPL23AP39-201ENST00000415533 405 ntBASIC2.54□□□□□ -2
COL18A1P39060 BTF3P4-201ENST00000418852 495 ntBASIC2.54□□□□□ -2
COL18A1P39060 AC244453.4-201ENST00000419150 388 ntBASIC2.54□□□□□ -2
COL18A1P39060 ARF4P2-201ENST00000430209 526 ntBASIC2.54□□□□□ -2
COL18A1P39060 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.54□□□□□ -2
COL18A1P39060 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL18A1P39060 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.54□□□□□ -2
COL18A1P39060 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.54□□□□□ -2
COL18A1P39060 TTC39CP1-201ENST00000512513 755 ntBASIC2.54□□□□□ -2
COL18A1P39060 RN7SKP96-201ENST00000516948 297 ntBASIC2.54□□□□□ -2
COL18A1P39060 HMGB1P1-201ENST00000522557 636 ntBASIC2.54□□□□□ -2
COL18A1P39060 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL18A1P39060 OR5D17P-201ENST00000531492 978 ntBASIC2.54□□□□□ -2
COL18A1P39060 AC087241.2-201ENST00000535801 324 ntBASIC2.54□□□□□ -2
COL18A1P39060 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
COL18A1P39060 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.54□□□□□ -2
COL18A1P39060 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
COL18A1P39060 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL18A1P39060 AC092326.2-201ENST00000624772 1561 ntBASIC2.54□□□□□ -2
COL18A1P39060 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.53□□□□□ -2
COL18A1P39060 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
COL18A1P39060 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL18A1P39060 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.53□□□□□ -2
COL18A1P39060 FGF7P8-201ENST00000402994 292 ntBASIC2.53□□□□□ -2
COL18A1P39060 MIR1303-201ENST00000408625 86 ntBASIC2.53□□□□□ -2
COL18A1P39060 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
COL18A1P39060 RPL23AP76-201ENST00000441860 458 ntBASIC2.53□□□□□ -2
COL18A1P39060 RPL37P6-202ENST00000464216 403 ntBASIC2.53□□□□□ -2
COL18A1P39060 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.53□□□□□ -2
COL18A1P39060 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.53□□□□□ -2
COL18A1P39060 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.53□□□□□ -2
COL18A1P39060 RNA5SP385-201ENST00000515947 110 ntBASIC2.53□□□□□ -2
COL18A1P39060 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
COL18A1P39060 AC091488.1-201ENST00000604239 660 ntBASIC2.53□□□□□ -2
COL18A1P39060 AP000787.2-201ENST00000604432 568 ntBASIC2.53□□□□□ -2
COL18A1P39060 AC113194.1-201ENST00000606037 500 ntBASIC2.53□□□□□ -2
COL18A1P39060 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.53□□□□□ -2
COL18A1P39060 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.53□□□□□ -2
COL18A1P39060 AC006065.5-201ENST00000623427 349 ntBASIC2.53□□□□□ -2
COL18A1P39060 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.53□□□□□ -2
COL18A1P39060 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
COL18A1P39060 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL18A1P39060 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL18A1P39060 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.52□□□□□ -2.01
COL18A1P39060 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL18A1P39060 AC007256.1-201ENST00000392253 2765 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 SNORA25.9-201ENST00000365087 128 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 BTBD10P2-201ENST00000404779 676 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 U3.37-201ENST00000408528 213 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 RPL31P2-201ENST00000413849 377 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.52□□□□□ -2.01
COL18A1P39060 ZNF965P-201ENST00000432501 817 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL18A1P39060 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.52□□□□□ -2.01
COL18A1P39060 SNRPGP3-201ENST00000469405 227 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.52□□□□□ -2.01
COL18A1P39060 AC104689.1-201ENST00000473356 768 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AC078918.1-201ENST00000498515 228 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.52□□□□□ -2.01
COL18A1P39060 AC008494.2-201ENST00000514544 370 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 snoZ278.1-201ENST00000517059 112 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.52□□□□□ -2.01
COL18A1P39060 NOP56P3-201ENST00000549457 385 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AC012414.2-201ENST00000559474 187 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.52□□□□□ -2.01
COL18A1P39060 AC079610.2-201ENST00000604818 690 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AC090425.2-201ENST00000608818 501 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 AL157700.1-201ENST00000561973 1432 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 SEPT7P7-201ENST00000420492 1301 ntBASIC2.52□□□□□ -2.01
COL18A1P39060 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
COL18A1P39060 MTATP6P31-201ENST00000406985 692 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 MIR1294-201ENST00000408503 142 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.51□□□□□ -2.01
COL18A1P39060 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.51□□□□□ -2.01
COL18A1P39060 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.51□□□□□ -2.01
COL18A1P39060 AC097499.1-201ENST00000444277 208 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 AC245517.4-201ENST00000448601 281 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms