Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.63□□□□□ -2.15
SNCAP37840 RNA5SP289-201ENST00000362332 137 ntBASIC1.63□□□□□ -2.15
SNCAP37840 RNU6-1251P-201ENST00000364502 107 ntBASIC1.63□□□□□ -2.15
SNCAP37840 MIR17-201ENST00000385012 84 ntBASIC1.63□□□□□ -2.15
SNCAP37840 AC244033.1-201ENST00000426826 870 ntBASIC1.63□□□□□ -2.15
SNCAP37840 AL445687.1-201ENST00000439946 251 ntBASIC1.63□□□□□ -2.15
SNCAP37840 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.63□□□□□ -2.15
SNCAP37840 RPL31P50-201ENST00000471002 296 ntBASIC1.63□□□□□ -2.15
SNCAP37840 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SNCAP37840 AC104090.1-201ENST00000506341 1171 ntBASIC1.63□□□□□ -2.15
SNCAP37840 FABP5P6-201ENST00000510588 409 ntBASIC1.63□□□□□ -2.15
SNCAP37840 AC006499.2-201ENST00000513470 337 ntBASIC1.63□□□□□ -2.15
SNCAP37840 OR10V3P-201ENST00000525712 725 ntBASIC1.63□□□□□ -2.15
SNCAP37840 AP003122.3-201ENST00000526316 255 ntBASIC1.63□□□□□ -2.15
SNCAP37840 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SNCAP37840 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.63□□□□□ -2.15
SNCAP37840 AP002770.2-201ENST00000543613 532 ntBASIC1.63□□□□□ -2.15
SNCAP37840 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.63□□□□□ -2.15
SNCAP37840 TRAV28-201ENST00000557548 323 ntBASIC1.63□□□□□ -2.15
SNCAP37840 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.63□□□□□ -2.15
SNCAP37840 MTCO2P22-201ENST00000603246 681 ntBASIC1.63□□□□□ -2.15
SNCAP37840 BNIP3P7-201ENST00000605641 516 ntBASIC1.63□□□□□ -2.15
SNCAP37840 AP004247.3-201ENST00000608682 624 ntBASIC1.63□□□□□ -2.15
SNCAP37840 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.63□□□□□ -2.15
SNCAP37840 AC243829.7-201ENST00000633081 225 ntBASIC1.63□□□□□ -2.15
SNCAP37840 AL137003.2-201ENST00000606924 2538 ntBASIC1.63□□□□□ -2.15
SNCAP37840 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.62□□□□□ -2.15
SNCAP37840 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SNCAP37840 FAM133CP-201ENST00000332869 704 ntBASIC1.62□□□□□ -2.15
SNCAP37840 RNU6-837P-201ENST00000391056 108 ntBASIC1.62□□□□□ -2.15
SNCAP37840 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.62□□□□□ -2.15
SNCAP37840 SNORD23.1-201ENST00000408212 104 ntBASIC1.62□□□□□ -2.15
SNCAP37840 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
SNCAP37840 AL135786.1-201ENST00000415892 214 ntBASIC1.62□□□□□ -2.15
SNCAP37840 NPM1P11-201ENST00000417106 855 ntBASIC1.62□□□□□ -2.15
SNCAP37840 AC027124.2-201ENST00000428249 105 ntBASIC1.62□□□□□ -2.15
SNCAP37840 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.62□□□□□ -2.15
SNCAP37840 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.62□□□□□ -2.15
SNCAP37840 AL136380.1-201ENST00000447970 162 ntBASIC1.62□□□□□ -2.15
SNCAP37840 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.62□□□□□ -2.15
SNCAP37840 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.62□□□□□ -2.15
SNCAP37840 AC097493.1-201ENST00000463958 372 ntBASIC1.62□□□□□ -2.15
SNCAP37840 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.62□□□□□ -2.15
SNCAP37840 RNU6-319P-201ENST00000516025 108 ntBASIC1.62□□□□□ -2.15
SNCAP37840 RN7SKP31-201ENST00000516354 278 ntBASIC1.62□□□□□ -2.15
SNCAP37840 AC107954.1-201ENST00000565906 727 ntBASIC1.62□□□□□ -2.15
SNCAP37840 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SNCAP37840 MFSD8-245ENST00000641743 948 ntBASIC1.62□□□□□ -2.15
SNCAP37840 AL354685.2-201ENST00000448218 1447 ntBASIC1.62□□□□□ -2.15
SNCAP37840 AL359715.4-201ENST00000606629 1436 ntBASIC1.62□□□□□ -2.15
SNCAP37840 AC006020.1-201ENST00000420179 1854 ntBASIC1.62□□□□□ -2.15
SNCAP37840 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
SNCAP37840 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNCAP37840 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNCAP37840 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SNCAP37840 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
SNCAP37840 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
SNCAP37840 SNORA16B-201ENST00000364674 135 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.61□□□□□ -2.15
SNCAP37840 AL023807.1-201ENST00000407932 359 ntBASIC1.61□□□□□ -2.15
SNCAP37840 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.61□□□□□ -2.15
SNCAP37840 PTP4A1P7-201ENST00000423476 514 ntBASIC1.61□□□□□ -2.15
SNCAP37840 HSFY1P1-201ENST00000423928 1178 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.61□□□□□ -2.15
SNCAP37840 AL356320.1-201ENST00000429616 163 ntBASIC1.61□□□□□ -2.15
SNCAP37840 OR4K11P-201ENST00000431829 904 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.61□□□□□ -2.15
SNCAP37840 MTCYBP45-201ENST00000435243 565 ntBASIC1.61□□□□□ -2.15
SNCAP37840 UBE2V1P13-201ENST00000436983 439 ntBASIC1.61□□□□□ -2.15
SNCAP37840 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.61□□□□□ -2.15
SNCAP37840 RNF2P1-201ENST00000442955 1010 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AC009237.8-201ENST00000445492 379 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.61□□□□□ -2.15
SNCAP37840 RPL23AP41-201ENST00000484754 458 ntBASIC1.61□□□□□ -2.15
SNCAP37840 HMGB3P17-201ENST00000504195 649 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.61□□□□□ -2.15
SNCAP37840 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.61□□□□□ -2.15
SNCAP37840 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.61□□□□□ -2.15
SNCAP37840 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.61□□□□□ -2.15
SNCAP37840 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.61□□□□□ -2.15
SNCAP37840 AP001317.1-201ENST00000531194 960 ntBASIC1.61□□□□□ -2.15
SNCAP37840 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.61□□□□□ -2.15
SNCAP37840 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.61□□□□□ -2.15
SNCAP37840 AC010546.1-201ENST00000569391 485 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.61□□□□□ -2.15
SNCAP37840 AC010378.1-201ENST00000619270 362 ntBASIC1.61□□□□□ -2.15
SNCAP37840 AC095031.1-201ENST00000623685 672 ntBASIC1.61□□□□□ -2.15
SNCAP37840 SGO1P2-201ENST00000429458 1589 ntBASIC1.6□□□□□ -2.15
SNCAP37840 SNORA3A-201ENST00000364113 130 ntBASIC1.6□□□□□ -2.15
SNCAP37840 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SNCAP37840 SNORD65-201ENST00000391079 73 ntBASIC1.6□□□□□ -2.15
SNCAP37840 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.6□□□□□ -2.15
SNCAP37840 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.6□□□□□ -2.15
SNCAP37840 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.6□□□□□ -2.15
SNCAP37840 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.6□□□□□ -2.15
SNCAP37840 AC009296.1-201ENST00000443146 155 ntBASIC1.6□□□□□ -2.15
SNCAP37840 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.6□□□□□ -2.15
SNCAP37840 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.6□□□□□ -2.15
SNCAP37840 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.6□□□□□ -2.15
SNCAP37840 AC108120.2-201ENST00000512973 294 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms