Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.64□□□□□ -1.99
SCN4AP35499 RPL23AP88-201ENST00000605759 454 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 AC124016.2-201ENST00000610058 665 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 AC245517.5-201ENST00000611529 162 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 AC009831.4-201ENST00000620744 325 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 AP003400.6-201ENST00000624698 740 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
SCN4AP35499 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SCN4AP35499 RNU2-2P-201ENST00000410396 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN4AP35499 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN4AP35499 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 U2.15-201ENST00000611544 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.16-201ENST00000613119 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.12-201ENST00000613778 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.20-201ENST00000613956 192 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.9-201ENST00000615427 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.11-201ENST00000616345 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.2-201ENST00000616535 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.3-201ENST00000617785 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 U2.19-201ENST00000618602 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 RNU2-1-201ENST00000618664 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.6-201ENST00000619225 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.5-201ENST00000619465 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 U2.10-201ENST00000620268 191 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 MIR221-201ENST00000385135 110 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN4AP35499 RNU6-1140P-201ENST00000410517 106 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC006548.1-201ENST00000427470 102 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 AL512637.2-201ENST00000431287 1256 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN4AP35499 MTND3P24-201ENST00000506306 329 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 SCARNA16.3-201ENST00000516595 184 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 RNA5SP402-201ENST00000517148 110 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN4AP35499 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN4AP35499 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 AL512506.1-201ENST00000613918 449 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 AC104307.1-201ENST00000616142 196 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 AL109659.3-201ENST00000624985 950 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 CR381572.1-201ENST00000625098 102 ntBASIC2.63□□□□□ -1.99
SCN4AP35499 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.63□□□□□ -1.99
SCN4AP35499 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.62□□□□□ -1.99
SCN4AP35499 ZNF33CP-201ENST00000432492 2030 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCN4AP35499 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN4AP35499 RNU6-356P-201ENST00000384140 107 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 MIR591-201ENST00000385290 95 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN4AP35499 AL357078.2-201ENST00000416486 427 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AL353729.1-201ENST00000425044 720 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC092634.2-201ENST00000428146 1010 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC104332.2-201ENST00000429959 156 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC002542.1-201ENST00000440683 193 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 snoU13.18-201ENST00000459483 104 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC012170.1-201ENST00000495139 359 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN4AP35499 RNU6-467P-201ENST00000517027 110 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC123904.3-201ENST00000547218 814 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC078814.3-201ENST00000553036 491 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 AC084757.1-201ENST00000559987 490 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN4AP35499 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN4AP35499 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN4AP35499 AC006213.5-201ENST00000619673 288 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SCN4AP35499 AC114546.3-201ENST00000623582 1734 ntBASIC2.62□□□□□ -1.99
SCN4AP35499 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCN4AP35499 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCN4AP35499 SEC63P2-201ENST00000503863 1939 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCN4AP35499 VTRNA1-1-201ENST00000363120 99 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 RNU6-932P-201ENST00000391108 106 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 SAR1AP2-201ENST00000392696 594 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN4AP35499 AL139156.1-201ENST00000412785 841 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AL158050.1-201ENST00000416077 457 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.61□□□□□ -1.99
SCN4AP35499 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN4AP35499 DEFB130D-201ENST00000426866 237 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 Z77249.1-201ENST00000444622 1175 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 MOB1AP2-201ENST00000446060 614 ntBASIC2.61□□□□□ -1.99
SCN4AP35499 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms