Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU7-59P-201ENST00000459101 61 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 RPL37P6-202ENST00000464216 403 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 AC008694.2-201ENST00000517591 306 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 OR8L1P-201ENST00000534005 955 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AC106785.1-201ENST00000565935 262 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AC105224.1-201ENST00000587055 421 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AC007038.2-201ENST00000608095 740 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC6A4P31645 SNX18P1Y-201ENST00000616231 511 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AL356585.4-201ENST00000623078 1229 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 AC040168.1-201ENST00000623594 991 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 AC112204.3-201ENST00000623822 332 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 MTCO1P24-201ENST00000515438 1558 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 NMD3P1-201ENST00000439704 1488 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC6A4P31645 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC6A4P31645 Y_RNA.38-201ENST00000362617 102 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 RNY3P3-201ENST00000363816 102 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 RNU6-1078P-201ENST00000364522 103 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 MIR134-201ENST00000385258 73 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 RNU6-908P-201ENST00000410160 94 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC6A4P31645 RPL21P111-201ENST00000418453 477 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 EIF4EP1-201ENST00000422311 642 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC6A4P31645 AC007283.2-201ENST00000424739 197 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 RPL35AP22-201ENST00000436855 335 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 RPL23AP46-201ENST00000438548 490 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 MTND4LP16-201ENST00000440828 295 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 HMGB3P9-201ENST00000441799 583 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC6A4P31645 RPL29P29-201ENST00000448725 423 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 FDX1P2-201ENST00000450769 375 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 SNRPGP6-201ENST00000451124 220 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC6A4P31645 AP000852.1-201ENST00000472460 573 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC6A4P31645 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC6A4P31645 AC021146.1-201ENST00000511202 716 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AC025465.4-201ENST00000513422 638 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC6A4P31645 AC098848.2-201ENST00000588023 330 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 BNIP3P9-201ENST00000603714 553 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AL136363.1-201ENST00000605349 337 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AC105429.2-201ENST00000610567 517 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AC245517.5-201ENST00000611529 162 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC6A4P31645 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SLC6A4P31645 BMS1P21-201ENST00000634565 365 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC6A4P31645 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC6A4P31645 LINC01109-201ENST00000603837 3081 ntBASIC4.29□□□□□ -1.72
SLC6A4P31645 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SLC6A4P31645 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC6A4P31645 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SLC6A4P31645 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC6A4P31645 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC6A4P31645 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 MTND4P12-201ENST00000498999 1377 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC116667.1-201ENST00000604855 2072 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC6A4P31645 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SLC6A4P31645 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SLC6A4P31645 SPRR2C-201ENST00000290702 219 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 OR1S2-201ENST00000302592 978 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 Y_RNA.70-201ENST00000362886 110 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 SNORD56.2-201ENST00000363242 71 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 RNY3P13-201ENST00000365542 102 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AL359837.1-201ENST00000381357 287 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 RNA5SP56-201ENST00000410277 118 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC098614.3-201ENST00000438957 440 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 AC006011.1-201ENST00000442758 349 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 SNRPEP8-201ENST00000442866 260 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 DDX3P2-201ENST00000446138 111 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms