Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 OR2A20P-203ENST00000498397 1268 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC8P31273 KLHL2P1-201ENST00000508691 521 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC8P31273 MTND5P13-201ENST00000513046 1079 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXC8P31273 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC8P31273 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC8P31273 AL031176.1-201ENST00000604554 466 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 AC135507.1-201ENST00000607214 561 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 AC022149.2-201ENST00000621061 203 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC8P31273 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC8P31273 AC097714.1-201ENST00000511272 1647 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HOXC8P31273 NCAPGP1-201ENST00000505112 1814 ntBASIC3.72□□□□□ -1.81
HOXC8P31273 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC8P31273 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC8P31273 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC8P31273 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
HOXC8P31273 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.71□□□□□ -1.81
HOXC8P31273 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
HOXC8P31273 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC8P31273 Y_RNA.111-201ENST00000363248 100 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 SNORA4.1-201ENST00000364263 144 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 DEFB109C-201ENST00000382575 264 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 DEFB109B-201ENST00000382656 264 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 RNU6-253P-201ENST00000384730 105 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 CYCSP45-201ENST00000402289 315 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AC068533.2-201ENST00000411872 306 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC8P31273 BTF3L4P1-201ENST00000413813 468 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC8P31273 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC8P31273 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC8P31273 AL353705.1-201ENST00000433468 480 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC8P31273 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC8P31273 AC005297.2-201ENST00000450430 606 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 MTCO3P16-201ENST00000454456 754 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 TPTE2P5-203ENST00000458118 728 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 RPS4XP2-201ENST00000458402 793 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 RPL7P38-201ENST00000488396 739 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 MTCYBP17-201ENST00000503579 789 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 TMEM251P1-201ENST00000503717 318 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AC021146.1-201ENST00000511202 716 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 RNU6-1095P-201ENST00000516148 108 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 RNY4P37-201ENST00000516225 96 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC8P31273 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC8P31273 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC8P31273 AL360157.1-201ENST00000565962 87 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AL512347.1-201ENST00000566420 503 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC8P31273 AC012669.1-201ENST00000603209 283 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AC006270.3-201ENST00000605967 1036 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC8P31273 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.71□□□□□ -1.82
HOXC8P31273 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC8P31273 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC8P31273 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC8P31273 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
HOXC8P31273 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC8P31273 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC8P31273 CR383658.2-201ENST00000547576 1525 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC073073.2-201ENST00000609827 2578 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC8P31273 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC8P31273 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC8P31273 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC8P31273 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC8P31273 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC8P31273 RNU6-173P-201ENST00000364215 104 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC8P31273 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC8P31273 MTCO2P5-201ENST00000422621 426 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 RPL18AP17-201ENST00000455326 198 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AP001992.1-205ENST00000462248 379 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 RPL30P6-201ENST00000475925 342 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC093278.1-201ENST00000494700 600 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC080014.1-201ENST00000496877 1201 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC8P31273 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC8P31273 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXC8P31273 AC005178.1-201ENST00000508392 440 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC093281.2-201ENST00000510153 597 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC8P31273 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC8P31273 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC8P31273 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC8P31273 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXC8P31273 AP000811.1-201ENST00000603803 651 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC018714.1-201ENST00000605028 208 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC011939.3-201ENST00000613686 466 ntBASIC3.7□□□□□ -1.82
HOXC8P31273 AC025588.4-201ENST00000615802 908 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms