Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-1316P-201ENST00000384242 108 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AL356968.1-201ENST00000416622 474 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA13P31271 UBE2FP3-201ENST00000436366 524 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXA13P31271 ATP5C1P1-201ENST00000441945 895 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA13P31271 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA13P31271 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA13P31271 AL353691.1-201ENST00000451332 387 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 Z82190.1-201ENST00000454534 490 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA13P31271 AC093809.1-201ENST00000509155 340 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 TXNP6-201ENST00000510190 310 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA13P31271 AC107934.2-201ENST00000518653 310 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC013828.2-201ENST00000532487 235 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC135279.1-201ENST00000543493 504 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 SETP7-201ENST00000552169 453 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA13P31271 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA13P31271 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA13P31271 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA13P31271 AC087481.2-201ENST00000565492 330 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC012182.1-201ENST00000570133 895 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC005951.1-201ENST00000576706 485 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AL596245.1-201ENST00000618994 362 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AL356585.4-201ENST00000623078 1229 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AF246928.1-201ENST00000623768 87 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 AC091965.5-201ENST00000624785 342 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HOXA13P31271 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXA13P31271 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA13P31271 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA13P31271 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA13P31271 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXA13P31271 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXA13P31271 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
HOXA13P31271 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA13P31271 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA13P31271 Y_RNA.234-201ENST00000364409 97 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 RNU6-1207P-201ENST00000384343 107 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 MIR607-201ENST00000385241 96 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 U3.19-201ENST00000390893 196 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AL021407.1-201ENST00000404531 386 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXA13P31271 CYP4F29P-201ENST00000420685 446 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXA13P31271 AL590103.1-201ENST00000434488 307 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 UBE2D3P4-201ENST00000441973 436 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXA13P31271 RPL9P32-201ENST00000464118 620 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 RPL23AP67-201ENST00000465341 474 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC092451.1-201ENST00000480211 153 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC106872.3-201ENST00000495104 446 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXA13P31271 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXA13P31271 MLLT10P2-201ENST00000506434 249 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC111000.2-201ENST00000507775 550 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXA13P31271 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXA13P31271 MIR2276-201ENST00000516886 89 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.76□□□□□ -1.81
HOXA13P31271 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.76□□□□□ -1.81
HOXA13P31271 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXA13P31271 HIGD1AP1-201ENST00000550979 275 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.76□□□□□ -1.81
HOXA13P31271 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.76□□□□□ -1.81
HOXA13P31271 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXA13P31271 AC015917.1-201ENST00000579654 510 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXA13P31271 AC007687.1-201ENST00000602704 304 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 OR2AS2P-201ENST00000606902 342 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC097468.3-201ENST00000607956 456 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC107214.2-201ENST00000608204 634 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC122133.1-201ENST00000613964 233 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC009090.3-201ENST00000616553 565 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXA13P31271 AL603755.1-201ENST00000619504 163 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC139792.2-201ENST00000624218 587 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AC092192.1-201ENST00000633154 1018 ntBASIC3.76□□□□□ -1.81
HOXA13P31271 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXA13P31271 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA13P31271 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA13P31271 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
HOXA13P31271 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA13P31271 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA13P31271 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXA13P31271 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXA13P31271 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
HOXA13P31271 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXA13P31271 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXA13P31271 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.75□□□□□ -1.81
HOXA13P31271 RNU6-433P-201ENST00000363216 104 ntBASIC3.75□□□□□ -1.81
HOXA13P31271 RNU6-853P-201ENST00000364306 107 ntBASIC3.75□□□□□ -1.81
HOXA13P31271 SNORA51.2-201ENST00000364595 132 ntBASIC3.75□□□□□ -1.81
HOXA13P31271 MIR483-201ENST00000385070 76 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms