Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC090774.1-201ENST00000435925 246 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.8□□□□□ -1.64
CNGA1P29973 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.8□□□□□ -1.64
CNGA1P29973 AC093899.1-201ENST00000457984 376 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 S100A11P1-201ENST00000477525 312 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 RNA5SP73-201ENST00000516744 108 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 HMGN1P28-201ENST00000521340 364 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.8□□□□□ -1.64
CNGA1P29973 AC022616.3-201ENST00000523940 148 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.8□□□□□ -1.64
CNGA1P29973 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.8□□□□□ -1.64
CNGA1P29973 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.8□□□□□ -1.64
CNGA1P29973 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.8□□□□□ -1.64
CNGA1P29973 AC107304.1-201ENST00000604229 296 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 AL034351.1-201ENST00000605288 668 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 Z98200.1-201ENST00000607298 470 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.8□□□□□ -1.64
CNGA1P29973 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.8□□□□□ -1.64
CNGA1P29973 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CNGA1P29973 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CNGA1P29973 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.8□□□□□ -1.64
CNGA1P29973 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CNGA1P29973 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNGA1P29973 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.79□□□□□ -1.64
CNGA1P29973 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.79□□□□□ -1.64
CNGA1P29973 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNGA1P29973 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 SNORA7.2-201ENST00000364446 145 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 SNORA20.2-201ENST00000383922 131 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 RNU6-1103P-201ENST00000384150 107 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNGA1P29973 AL109755.1-201ENST00000401791 649 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 RNU2-62P-201ENST00000410868 191 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC079780.1-201ENST00000428259 207 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC005094.1-201ENST00000440420 368 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.79□□□□□ -1.64
CNGA1P29973 RPL23AP81-201ENST00000455252 467 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.79□□□□□ -1.64
CNGA1P29973 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.79□□□□□ -1.64
CNGA1P29973 snoU13.24-201ENST00000458998 104 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 RPL7L1P8-201ENST00000469911 741 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC025445.1-201ENST00000502728 300 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.79□□□□□ -1.64
CNGA1P29973 RNA5SP154-201ENST00000516193 111 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 RN7SKP244-201ENST00000516513 307 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC090281.1-201ENST00000523019 276 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.79□□□□□ -1.64
CNGA1P29973 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.79□□□□□ -1.64
CNGA1P29973 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.79□□□□□ -1.64
CNGA1P29973 AC069240.1-201ENST00000548774 375 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC087883.1-201ENST00000551882 391 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC125611.2-201ENST00000551907 647 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.79□□□□□ -1.64
CNGA1P29973 TPRKBP2-201ENST00000565969 475 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.79□□□□□ -1.64
CNGA1P29973 AC120057.2-201ENST00000571520 271 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 MTND6P33-201ENST00000571794 183 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC006270.2-201ENST00000578523 652 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.79□□□□□ -1.64
CNGA1P29973 AL022099.1-201ENST00000604551 712 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 MIR98-201ENST00000606724 119 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AC006338.1-201ENST00000618453 749 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 AL603758.1-201ENST00000618654 241 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 MIR7154-201ENST00000620673 73 ntBASIC4.79□□□□□ -1.64
CNGA1P29973 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.79□□□□□ -1.64
CNGA1P29973 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNGA1P29973 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CNGA1P29973 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNGA1P29973 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNGA1P29973 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNGA1P29973 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CNGA1P29973 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNGA1P29973 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.79□□□□□ -1.64
CNGA1P29973 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNGA1P29973 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNGA1P29973 RNA5SP22-201ENST00000365393 109 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 MIR708-201ENST00000390708 88 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 RNU6-278P-201ENST00000390945 109 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 RNU4-6P-201ENST00000410804 122 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 RNA5SP104-201ENST00000410989 118 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.78□□□□□ -1.64
CNGA1P29973 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.78□□□□□ -1.64
CNGA1P29973 AC137499.1-201ENST00000427602 88 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.78□□□□□ -1.64
CNGA1P29973 AC004866.2-201ENST00000438285 481 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 RPL23AP46-201ENST00000438548 490 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 RPL36AP13-201ENST00000457490 317 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC012158.1-204ENST00000483430 465 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.78□□□□□ -1.64
CNGA1P29973 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.78□□□□□ -1.64
CNGA1P29973 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.78□□□□□ -1.64
CNGA1P29973 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.78□□□□□ -1.64
CNGA1P29973 AP003072.2-201ENST00000527756 676 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CNGA1P29973 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.78□□□□□ -1.64
CNGA1P29973 CCNG2P1-201ENST00000549521 1000 ntBASIC4.78□□□□□ -1.64
CNGA1P29973 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.78□□□□□ -1.64
CNGA1P29973 AL845331.3-202ENST00000562856 261 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms