Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL034379.1-201ENST00000423216 253 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.36□□□□□ -1.71
COL11A2P13942 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.36□□□□□ -1.71
COL11A2P13942 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.36□□□□□ -1.71
COL11A2P13942 RPL23AP20-201ENST00000447965 421 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AC092757.1-201ENST00000467293 467 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AL035404.1-201ENST00000497982 568 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AC114967.1-201ENST00000504890 259 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A2P13942 Vault.1-201ENST00000516474 102 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 RNU6-885P-201ENST00000516607 104 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
COL11A2P13942 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.36□□□□□ -1.71
COL11A2P13942 AC011611.1-201ENST00000552179 197 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.36□□□□□ -1.71
COL11A2P13942 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.36□□□□□ -1.71
COL11A2P13942 MIR4795-201ENST00000584182 89 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AC013553.2-201ENST00000604244 589 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AC093311.1-201ENST00000506586 2021 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AC245100.2-201ENST00000454544 1679 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AC138915.3-201ENST00000562908 1389 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A2P13942 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A2P13942 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A2P13942 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A2P13942 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL11A2P13942 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL11A2P13942 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A2P13942 RNU6-1322P-201ENST00000364309 107 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 Y_RNA.409-201ENST00000383990 98 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 Y_RNA.460-201ENST00000384255 102 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 SNORD115.1-201ENST00000391109 76 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC007390.1-201ENST00000415722 356 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 NDUFB1P1-201ENST00000435191 180 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC092809.1-201ENST00000441469 474 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A2P13942 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.35□□□□□ -1.71
COL11A2P13942 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 OR6K1P-201ENST00000456766 971 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 MEMO1P3-201ENST00000459811 302 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC021205.1-201ENST00000468797 348 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 RN7SL504P-201ENST00000494496 287 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 NIPA2P2-201ENST00000496376 1083 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC018710.1-201ENST00000506509 158 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 Y_RNA.675-201ENST00000516389 149 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A2P13942 AP003072.1-201ENST00000531740 145 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.35□□□□□ -1.71
COL11A2P13942 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.35□□□□□ -1.71
COL11A2P13942 HPRT1P3-201ENST00000539521 576 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A2P13942 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A2P13942 AC055876.5-201ENST00000605667 259 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AP004247.3-201ENST00000608682 624 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC145207.9-201ENST00000623802 325 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC006378.2-201ENST00000623178 2476 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A2P13942 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A2P13942 MUC2-202ENST00000613187 4845 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A2P13942 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A2P13942 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A2P13942 SNORA38.1-201ENST00000364172 131 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 RNY4P34-201ENST00000364779 95 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 Y_RNA.326-201ENST00000365176 113 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL11A2P13942 GSTM3P2-201ENST00000412746 530 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.35□□□□□ -1.71
COL11A2P13942 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 RNU7-27P-201ENST00000459281 62 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
COL11A2P13942 HMGB1P28-201ENST00000507778 552 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 RNU6-583P-201ENST00000516012 92 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 RNA5SP341-201ENST00000516261 117 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 RNU6-445P-201ENST00000516949 107 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.35□□□□□ -1.71
COL11A2P13942 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A2P13942 AP003034.1-201ENST00000534621 422 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.35□□□□□ -1.71
COL11A2P13942 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A2P13942 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.35□□□□□ -1.71
COL11A2P13942 AC245014.2-201ENST00000603689 287 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC246785.4-201ENST00000605374 287 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC012603.1-201ENST00000606424 528 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC093788.1-201ENST00000609356 927 ntBASIC4.35□□□□□ -1.71
COL11A2P13942 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL11A2P13942 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
COL11A2P13942 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A2P13942 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A2P13942 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A2P13942 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL11A2P13942 MIR506-201ENST00000384998 124 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms