Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD8P13378 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD8P13378 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD8P13378 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXD8P13378 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXD8P13378 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXD8P13378 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXD8P13378 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXD8P13378 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HOXD8P13378 RNU6-713P-201ENST00000384761 107 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AL357515.1-201ENST00000402967 542 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXD8P13378 RPLP0P7-201ENST00000416050 667 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AL645608.4-201ENST00000423619 154 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 RPL23AP38-201ENST00000423801 469 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 RPL21P112-201ENST00000434403 463 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXD8P13378 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXD8P13378 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD8P13378 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXD8P13378 RPS5P7-201ENST00000456664 608 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXD8P13378 AC090602.1-201ENST00000469695 252 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 RN7SL481P-201ENST00000477764 299 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXD8P13378 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXD8P13378 ENPP7P9-201ENST00000514456 627 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 RNU6-1143P-201ENST00000516125 104 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AC022882.1-201ENST00000532142 501 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXD8P13378 DYNLL1P4-201ENST00000549314 266 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AC040958.1-201ENST00000561102 201 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXD8P13378 AC009570.1-201ENST00000609599 745 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 AC073869.10-201ENST00000642016 354 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD8P13378 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXD8P13378 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD8P13378 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD8P13378 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXD8P13378 SMG1P6-201ENST00000532337 2930 ntBASIC5.47□□□□□ -1.53
HOXD8P13378 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HOXD8P13378 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXD8P13378 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXD8P13378 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
HOXD8P13378 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HOXD8P13378 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXD8P13378 AC126755.2-208ENST00000327792 462 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AC138969.1-213ENST00000331436 462 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXD8P13378 SNORA70F-201ENST00000384142 135 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 RNU6-306P-201ENST00000384617 107 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 Y_RNA.552-201ENST00000384665 112 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 Y_RNA.645-201ENST00000391229 102 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 MIR298-201ENST00000401212 88 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AL109755.1-201ENST00000401791 649 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 RPL21P24-201ENST00000413752 448 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 TBCAP2-201ENST00000416175 326 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 UBE2FP1-201ENST00000416536 447 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 USMG5P1-201ENST00000425964 177 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 C4BPAP2-201ENST00000428434 478 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 EEF1A1P1-201ENST00000447052 739 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 PPIAP3-201ENST00000450588 505 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 RN7SL385P-201ENST00000468873 276 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 RPS27AP1-201ENST00000475545 471 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXD8P13378 RNU6-27P-201ENST00000516146 107 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 SCARNA16.2-201ENST00000516520 172 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 RAB9BP1-201ENST00000519581 626 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXD8P13378 HSBP1P1-201ENST00000555205 166 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXD8P13378 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXD8P13378 MIR4293-201ENST00000584305 78 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AC008521.1-201ENST00000587471 187 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXD8P13378 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXD8P13378 AL670379.6-201ENST00000603753 252 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AL670379.1-201ENST00000604752 252 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AL670379.5-201ENST00000605253 252 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AL670379.8-201ENST00000605353 252 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 AL670379.7-201ENST00000605823 252 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXD8P13378 AC078938.1-201ENST00000620993 318 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXD8P13378 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXD8P13378 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXD8P13378 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXD8P13378 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
HOXD8P13378 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
HOXD8P13378 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXD8P13378 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXD8P13378 AC104118.1-201ENST00000607625 1589 ntBASIC5.46□□□□□ -1.54
HOXD8P13378 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXD8P13378 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
HOXD8P13378 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXD8P13378 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXD8P13378 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms