Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL731566.1-201ENST00000620490 1937 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 Y_RNA.5-201ENST00000362334 102 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RNA5SP515-201ENST00000364570 118 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-39P-201ENST00000384344 107 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 Y_RNA.527-201ENST00000384573 102 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-278P-201ENST00000390945 109 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 MRPL42P3-201ENST00000401492 326 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 MIR548I3-201ENST00000408378 149 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 MIR548I1-201ENST00000408810 149 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AL591848.1-201ENST00000413092 322 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AL354868.1-201ENST00000417077 482 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC140479.3-201ENST00000418944 1126 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AL645608.4-201ENST00000423619 154 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AL138785.1-201ENST00000425821 331 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RPL7L1P10-201ENST00000427790 463 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RPS20P5-201ENST00000434808 360 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC107399.1-201ENST00000451226 265 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 NIP7P2-201ENST00000485801 544 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 HSPD1P15-201ENST00000505573 1122 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-388P-201ENST00000517012 105 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-389P-201ENST00000517048 105 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 SETP7-201ENST00000552169 453 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 NCAPGP2-201ENST00000557911 754 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC067852.4-201ENST00000590314 478 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC025857.2-201ENST00000602711 238 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AL390240.1-201ENST00000612950 384 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 MTND5P19-201ENST00000424872 1794 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RAD17P1-201ENST00000418130 2042 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 AC093671.1-201ENST00000624981 2929 ntBASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CSB-PGBD3P0DP91 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 MTND5P10-201ENST00000603719 1809 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC093591.2-201ENST00000565254 3843 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 RNU6-1188P-201ENST00000363795 107 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 Y_RNA.176-201ENST00000363815 109 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 U3.11-201ENST00000364476 212 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 RNU4-66P-201ENST00000365199 138 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 Y_RNA.414-201ENST00000384011 101 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 RN7SKP267-201ENST00000410381 285 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 RN7SKP158-201ENST00000410453 326 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AL669831.1-202ENST00000428504 417 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 PRPS1P1-201ENST00000445305 876 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AL035666.1-201ENST00000446195 348 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC104058.1-201ENST00000448028 297 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 ELOCP24-201ENST00000456370 334 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 RPL30P15-201ENST00000457129 321 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 RNU7-59P-201ENST00000459101 61 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 MIR2053-201ENST00000459295 91 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 RN7SL558P-201ENST00000497468 299 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AP002404.1-201ENST00000532005 451 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC103710.2-201ENST00000609912 942 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 FAM157A-202ENST00000615155 405 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 AC025031.4-201ENST00000621248 3271 ntBASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CSB-PGBD3P0DP91 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CSB-PGBD3P0DP91 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 TAB3P1-202ENST00000452645 1634 ntBASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.33□□□□□ -1.4
CSB-PGBD3P0DP91 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms