Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.08□□□□□ -2.08
COL4A2P08572 AP004242.1-201ENST00000533701 349 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.08□□□□□ -2.08
COL4A2P08572 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL4A2P08572 AC110588.1-201ENST00000559699 137 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AC013562.2-201ENST00000611632 603 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL4A2P08572 AC005156.1-201ENST00000613371 573 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AC003001.2-201ENST00000616294 831 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AC092650.2-201ENST00000619984 902 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL4A2P08572 AL109659.3-201ENST00000624985 950 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 ADAM3A-203ENST00000461344 2157 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A2P08572 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.08□□□□□ -2.08
COL4A2P08572 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL4A2P08572 ENSAP3-201ENST00000312710 333 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 PRRC2CP1-201ENST00000404428 159 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 RNA5SP181-201ENST00000410246 98 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 RNU6-272P-201ENST00000411028 104 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.08□□□□□ -2.08
COL4A2P08572 AC008173.1-201ENST00000418901 264 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 OR51AB1P-201ENST00000429046 620 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 PSMA2P3-201ENST00000429685 675 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.08□□□□□ -2.08
COL4A2P08572 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A2P08572 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A2P08572 AC026616.1-201ENST00000523157 525 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.08□□□□□ -2.08
COL4A2P08572 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A2P08572 KATNBL1P5-201ENST00000605015 517 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AC021851.1-201ENST00000608537 1082 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AC093673.2-201ENST00000609674 331 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AP003400.6-201ENST00000624698 740 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.08□□□□□ -2.08
COL4A2P08572 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL4A2P08572 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A2P08572 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A2P08572 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.07□□□□□ -2.08
COL4A2P08572 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.07□□□□□ -2.08
COL4A2P08572 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A2P08572 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A2P08572 RNU6-1339P-201ENST00000363574 91 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 RNU6-1005P-201ENST00000384519 107 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.07□□□□□ -2.08
COL4A2P08572 RPS15AP40-201ENST00000419621 391 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.07□□□□□ -2.08
COL4A2P08572 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.07□□□□□ -2.08
COL4A2P08572 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.07□□□□□ -2.08
COL4A2P08572 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.07□□□□□ -2.08
COL4A2P08572 MTCYBP31-201ENST00000438855 1122 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.07□□□□□ -2.08
COL4A2P08572 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.07□□□□□ -2.08
COL4A2P08572 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.07□□□□□ -2.08
COL4A2P08572 GTF2IP9-201ENST00000502460 301 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.07□□□□□ -2.08
COL4A2P08572 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.07□□□□□ -2.08
COL4A2P08572 LINC00557-201ENST00000563184 1279 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 BNIP3P8-201ENST00000597863 560 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 AC120053.1-201ENST00000607706 736 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A2P08572 AL163051.2-201ENST00000618976 735 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 AC138649.5-201ENST00000637456 137 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
COL4A2P08572 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL4A2P08572 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL4A2P08572 AF127577.6-201ENST00000623352 2191 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 AC011978.2-201ENST00000569835 2054 ntBASIC2.07□□□□□ -2.08
COL4A2P08572 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
COL4A2P08572 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
COL4A2P08572 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
COL4A2P08572 RNU6-543P-201ENST00000362576 108 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 UBE2V1P15-201ENST00000407776 448 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 MIR1250-201ENST00000408098 113 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 AC244098.2-201ENST00000422068 99 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 AC108667.1-201ENST00000428618 249 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A2P08572 RPL7P5-201ENST00000471472 736 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.06□□□□□ -2.08
COL4A2P08572 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.06□□□□□ -2.08
COL4A2P08572 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.06□□□□□ -2.08
COL4A2P08572 AC005951.1-201ENST00000576706 485 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 MIR4498-201ENST00000577599 66 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 DUXAP3-201ENST00000603616 594 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 AL354696.1-201ENST00000614652 497 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 AC034102.8-201ENST00000615146 484 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 MTND5P3-201ENST00000438536 1800 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.06□□□□□ -2.08
COL4A2P08572 SEPT7P7-201ENST00000420492 1301 ntBASIC2.06□□□□□ -2.08
COL4A2P08572 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A2P08572 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
COL4A2P08572 SNORA31-201ENST00000362607 130 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 Y_RNA.164-201ENST00000363709 102 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 RN7SKP226-201ENST00000364912 300 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 RNA5SP189-201ENST00000364920 115 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A2P08572 HMGN2P35-201ENST00000412164 270 ntBASIC2.05□□□□□ -2.08
COL4A2P08572 NUP35P2-201ENST00000416748 943 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms