Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 RNA5SP146-201ENST00000410743 123 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPNS1P04632 BX510359.2-201ENST00000417920 305 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AL451054.2-201ENST00000420896 202 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CAPNS1P04632 SAR1AP4-201ENST00000429225 591 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CAPNS1P04632 RPS29P10-201ENST00000439197 166 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 MRPL50P4-201ENST00000446432 475 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPNS1P04632 SNORA84-201ENST00000459229 133 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 RPS17P2-201ENST00000461663 408 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 HMGN2P26-201ENST00000463169 339 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPNS1P04632 AC104806.1-201ENST00000508720 308 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPNS1P04632 RNU4-49P-201ENST00000516080 140 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 Y_RNA.701-201ENST00000516812 110 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPNS1P04632 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPNS1P04632 CYCSP29-201ENST00000533731 318 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AP001880.2-201ENST00000538233 448 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.8□□□□□ -1.64
CAPNS1P04632 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.8□□□□□ -1.64
CAPNS1P04632 AC106782.4-201ENST00000568264 210 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CAPNS1P04632 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPNS1P04632 VN1R85P-201ENST00000601587 426 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AL022099.1-201ENST00000604551 712 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AL442067.2-201ENST00000614033 363 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AC099669.2-201ENST00000616549 437 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 uc_338.34-201ENST00000617467 174 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 AC110801.1-201ENST00000623590 212 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.8□□□□□ -1.64
CAPNS1P04632 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CAPNS1P04632 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CAPNS1P04632 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CAPNS1P04632 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPNS1P04632 AL138820.1-201ENST00000617901 5305 ntBASIC4.8□□□□□ -1.64
CAPNS1P04632 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CAPNS1P04632 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPNS1P04632 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPNS1P04632 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPNS1P04632 RNU4-79P-201ENST00000362764 141 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 RNU1-83P-201ENST00000363426 164 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 RNA5SP447-201ENST00000363749 119 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 RNU6-1279P-201ENST00000383917 103 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 snosnR66.1-201ENST00000391095 99 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 ARL4AP5-201ENST00000404372 599 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 SNORA11F-201ENST00000408237 128 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 Y_RNA.615-201ENST00000410769 117 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 RNU4-46P-201ENST00000410818 138 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AC009237.10-201ENST00000414112 510 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AC099677.1-201ENST00000420575 175 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 NRBF2P3-201ENST00000432731 865 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC093414.1-201ENST00000434712 514 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPNS1P04632 MTCO3P45-201ENST00000443036 613 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AL162389.1-201ENST00000449233 177 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC007967.1-201ENST00000455422 1159 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AL590639.1-201ENST00000456484 337 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPNS1P04632 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPNS1P04632 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPNS1P04632 RNU6-1095P-201ENST00000516148 108 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPNS1P04632 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPNS1P04632 AP005432.2-201ENST00000608162 586 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC007497.1-201ENST00000610421 561 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC005858.4-201ENST00000623191 700 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPNS1P04632 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CAPNS1P04632 API5P2-201ENST00000397055 1498 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPNS1P04632 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CAPNS1P04632 AL137003.2-201ENST00000606924 2538 ntBASIC4.79□□□□□ -1.64
CAPNS1P04632 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPNS1P04632 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CAPNS1P04632 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPNS1P04632 LARP1BP1-201ENST00000506036 1359 ntBASIC4.78□□□□□ -1.64
CAPNS1P04632 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CAPNS1P04632 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CAPNS1P04632 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.78□□□□□ -1.64
CAPNS1P04632 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CAPNS1P04632 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CAPNS1P04632 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CAPNS1P04632 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
CAPNS1P04632 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CAPNS1P04632 AL139811.1-201ENST00000424779 2299 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms