Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC006960.1-201ENST00000419980 153 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AC007435.1-201ENST00000421086 415 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 NUP35P1-201ENST00000422734 947 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 DUTP6-201ENST00000425573 462 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 GTF2IP3-201ENST00000433887 494 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 GTF2IP7-202ENST00000436677 309 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.2□□□□□ -1.9
CHRNA1P02708 MTCYBP11-201ENST00000447254 1109 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA1P02708 snoU109.3-201ENST00000459477 145 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 RPL31P50-201ENST00000471002 296 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA1P02708 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.2□□□□□ -1.9
CHRNA1P02708 KLHL2P1-201ENST00000508691 521 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.2□□□□□ -1.9
CHRNA1P02708 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA1P02708 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA1P02708 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA1P02708 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.2□□□□□ -1.9
CHRNA1P02708 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA1P02708 AC009237.15-201ENST00000610252 501 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AC010975.3-201ENST00000618727 978 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AC104985.3-201ENST00000623479 597 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 AC095031.1-201ENST00000623685 672 ntBASIC3.2□□□□□ -1.9
CHRNA1P02708 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CHRNA1P02708 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
CHRNA1P02708 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHRNA1P02708 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHRNA1P02708 RNU6-301P-201ENST00000384277 107 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 SNRPEP2-201ENST00000397592 279 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AL592148.1-201ENST00000413568 445 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AC092447.6-201ENST00000414578 210 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA1P02708 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA1P02708 MRPS36P1-201ENST00000421291 307 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA1P02708 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA1P02708 AC087499.2-201ENST00000432861 149 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.19□□□□□ -1.9
CHRNA1P02708 MTCO1P53-201ENST00000441633 699 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA1P02708 HMGB3P6-201ENST00000444896 598 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AL109933.2-201ENST00000452651 260 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 RFC5P1-201ENST00000454419 874 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 RPL23AP31-201ENST00000456160 467 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 HMGB1P25-201ENST00000468402 607 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.19□□□□□ -1.9
CHRNA1P02708 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHRNA1P02708 AC105914.1-201ENST00000511798 226 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.19□□□□□ -1.9
CHRNA1P02708 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.19□□□□□ -1.9
CHRNA1P02708 AC125611.1-201ENST00000549563 229 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA1P02708 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA1P02708 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA1P02708 NRBF2P5-201ENST00000603087 788 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AC024153.1-201ENST00000603103 365 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 PART1_2.1-201ENST00000612397 250 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 AC090617.7-201ENST00000623952 126 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA1P02708 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA1P02708 U6.101-201ENST00000637707 76 ntBASIC3.19□□□□□ -1.9
CHRNA1P02708 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA1P02708 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CHRNA1P02708 SGO1P2-201ENST00000429458 1589 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 CDR1-202ENST00000625883 1485 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 RNU5E-10P-201ENST00000363506 118 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 RNU6-173P-201ENST00000364215 104 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 U3.11-201ENST00000364476 212 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHRNA1P02708 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHRNA1P02708 RNU2-42P-201ENST00000410697 113 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA1P02708 LUZP4P1-201ENST00000415420 344 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AL137014.1-201ENST00000420490 1226 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 RPS20P5-201ENST00000434808 360 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AC092427.1-201ENST00000439177 601 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA1P02708 OFD1P3Y-201ENST00000453312 783 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AC104164.3-201ENST00000467363 1258 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AC108734.3-201ENST00000481241 1165 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AC108860.1-201ENST00000484521 383 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AC096751.1-202ENST00000502691 1067 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA1P02708 SNRPGP16-201ENST00000533275 226 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRNA1P02708 AC107016.2-201ENST00000547968 190 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AP001330.4-201ENST00000604350 154 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AC104763.3-201ENST00000613765 618 ntBASIC3.18□□□□□ -1.9
CHRNA1P02708 AL355810.1-201ENST00000614629 552 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms