Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MRPS17P3-201ENST00000465453 385 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 PROS2P-201ENST00000474651 1951 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.1□□□□□ -1.59
SRGAP3O43295 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.1□□□□□ -1.59
SRGAP3O43295 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.1□□□□□ -1.59
SRGAP3O43295 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.1□□□□□ -1.59
SRGAP3O43295 RNU7-143P-201ENST00000516781 65 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 SNORD60.2-201ENST00000516883 86 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 MYL12AP1-201ENST00000518490 515 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AC022616.3-201ENST00000523940 148 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 OR4R1P-201ENST00000529879 463 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 DYNLL1P4-201ENST00000549314 266 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.1□□□□□ -1.59
SRGAP3O43295 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.1□□□□□ -1.59
SRGAP3O43295 HMGB1P6-201ENST00000569046 646 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.1□□□□□ -1.59
SRGAP3O43295 MIR5684-201ENST00000585074 65 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AL133215.3-201ENST00000609801 448 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AC105429.2-201ENST00000610567 517 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 ZYXP1-201ENST00000617638 118 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AL354950.2-201ENST00000617939 290 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AC068831.8-201ENST00000620171 435 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AC112484.5-201ENST00000624189 228 ntBASIC5.1□□□□□ -1.59
SRGAP3O43295 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.1□□□□□ -1.59
SRGAP3O43295 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRGAP3O43295 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRGAP3O43295 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRGAP3O43295 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.09□□□□□ -1.59
SRGAP3O43295 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.09□□□□□ -1.59
SRGAP3O43295 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRGAP3O43295 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
SRGAP3O43295 RLIMP1-201ENST00000339626 1680 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC134882.1-201ENST00000603738 1676 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 RIOK3P1-201ENST00000418778 1528 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 MTCO1P9-201ENST00000505577 1534 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRGAP3O43295 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SRGAP3O43295 RNA5SP513-201ENST00000364648 118 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.09□□□□□ -1.59
SRGAP3O43295 Y_RNA.384-201ENST00000383909 102 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 SNORA37-201ENST00000384504 129 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 RNU6-510P-201ENST00000391239 108 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC016769.3-201ENST00000396562 315 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 ARF4P3-201ENST00000397387 509 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 LAP3P1-201ENST00000403648 294 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 RPL31P52-201ENST00000407532 367 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.09□□□□□ -1.59
SRGAP3O43295 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.09□□□□□ -1.59
SRGAP3O43295 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SRGAP3O43295 FTLP19-201ENST00000433300 394 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC010469.1-201ENST00000463864 576 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC006517.1-201ENST00000480485 328 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC093267.1-201ENST00000489176 961 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 EIF4EP3-201ENST00000498782 656 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SRGAP3O43295 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.09□□□□□ -1.59
SRGAP3O43295 NPM1P41-201ENST00000512920 831 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.09□□□□□ -1.59
SRGAP3O43295 AC112206.3-201ENST00000514578 389 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 RN7SKP21-201ENST00000516503 220 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.09□□□□□ -1.59
SRGAP3O43295 PSMA2P1-201ENST00000526365 646 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC068714.1-201ENST00000559623 800 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.09□□□□□ -1.59
SRGAP3O43295 AC007224.1-201ENST00000564410 144 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.09□□□□□ -1.59
SRGAP3O43295 AL391813.2-201ENST00000609113 322 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC015813.4-201ENST00000610469 179 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 C2orf27A-204ENST00000623058 969 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC008785.1-201ENST00000624475 456 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC068724.3-201ENST00000625906 87 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 RNA5SP196-201ENST00000625967 102 ntBASIC5.09□□□□□ -1.59
SRGAP3O43295 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.09□□□□□ -1.6
SRGAP3O43295 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.08□□□□□ -1.6
SRGAP3O43295 AC027228.2-201ENST00000567141 2154 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRGAP3O43295 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SRGAP3O43295 SPRR2C-201ENST00000290702 219 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRGAP3O43295 RPL7P26-201ENST00000333817 754 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 MIR372-201ENST00000362225 67 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 Y_RNA.184-201ENST00000363884 108 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 RNU4-1-201ENST00000363925 141 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 MIR606-201ENST00000384851 96 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 MIR1-2-201ENST00000384961 85 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 AL023807.1-201ENST00000407932 359 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.08□□□□□ -1.6
SRGAP3O43295 MTND3P8-201ENST00000412909 339 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 RPS15AP12-201ENST00000419498 388 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 AC006548.1-201ENST00000427470 102 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 AC236972.2-201ENST00000434979 310 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.08□□□□□ -1.6
SRGAP3O43295 MTND6P18-201ENST00000439477 513 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 RN7SL585P-201ENST00000470538 280 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 RPL7P42-201ENST00000481005 679 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 RPL29P14-201ENST00000495837 428 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 AC107934.1-201ENST00000522215 217 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.08□□□□□ -1.6
SRGAP3O43295 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms