Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A1O14983 AL445669.2-201ENST00000454425 421 ntBASIC3.82□□□□□ -1.8
ATP2A1O14983 BX322784.1-201ENST00000455793 1077 ntBASIC3.82□□□□□ -1.8
ATP2A1O14983 RPS4XP2-201ENST00000458402 793 ntBASIC3.82□□□□□ -1.8
ATP2A1O14983 S100A11P2-201ENST00000467589 312 ntBASIC3.82□□□□□ -1.8
ATP2A1O14983 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A1O14983 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A1O14983 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A1O14983 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.82□□□□□ -1.8
ATP2A1O14983 EEF1B2P4-201ENST00000551398 348 ntBASIC3.82□□□□□ -1.8
ATP2A1O14983 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.82□□□□□ -1.8
ATP2A1O14983 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.82□□□□□ -1.8
ATP2A1O14983 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.82□□□□□ -1.8
ATP2A1O14983 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.82□□□□□ -1.8
ATP2A1O14983 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A1O14983 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.82□□□□□ -1.8
ATP2A1O14983 IGHV3-29-201ENST00000604817 344 ntBASIC3.82□□□□□ -1.8
ATP2A1O14983 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.82□□□□□ -1.8
ATP2A1O14983 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A1O14983 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A1O14983 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ATP2A1O14983 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
ATP2A1O14983 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATP2A1O14983 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A1O14983 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATP2A1O14983 RNU6-263P-201ENST00000363811 107 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 RNU6-837P-201ENST00000391056 108 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.81□□□□□ -1.8
ATP2A1O14983 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 EZH2P1-201ENST00000431167 291 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 AL117351.1-201ENST00000438864 766 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 MTND2P22-201ENST00000444325 1033 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 MTCO1P27-201ENST00000448269 226 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 PAXBP1P1-201ENST00000449315 447 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 snoU109.4-201ENST00000458953 143 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.81□□□□□ -1.8
ATP2A1O14983 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.81□□□□□ -1.8
ATP2A1O14983 AC024589.1-201ENST00000512207 263 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 RNU6-27P-201ENST00000516146 107 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 OR6C7P-201ENST00000547875 934 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 ZNF192P1-203ENST00000565888 810 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 MIR4738-201ENST00000579134 87 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2A1O14983 BBIP1P1-201ENST00000602999 279 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 AC103710.3-201ENST00000608157 948 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A1O14983 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ATP2A1O14983 AC040168.1-201ENST00000623594 991 ntBASIC3.81□□□□□ -1.8
ATP2A1O14983 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2A1O14983 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATP2A1O14983 AC012321.1-201ENST00000561622 1588 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A1O14983 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A1O14983 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A1O14983 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A1O14983 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ATP2A1O14983 RNU6-777P-201ENST00000364265 104 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 RNU6-343P-201ENST00000364709 104 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 SNORD51-201ENST00000384320 80 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 Y_RNA.560-201ENST00000384689 102 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A1O14983 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AC063979.1-201ENST00000415539 377 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2A1O14983 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AC007742.1-201ENST00000425789 329 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A1O14983 ELOCP26-201ENST00000436067 329 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC002381.1-201ENST00000447049 280 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC008264.1-201ENST00000447612 367 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AP001992.1-205ENST00000462248 379 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 RPL23AP62-201ENST00000463396 453 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 RPL27AP5-201ENST00000469428 449 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 MTND3P7-201ENST00000474435 343 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2A1O14983 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AC068587.4-201ENST00000533893 186 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC024224.1-201ENST00000538284 609 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC091515.1-201ENST00000548110 679 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2A1O14983 HIGD1AP1-201ENST00000550979 275 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2A1O14983 AL390208.1-201ENST00000605885 644 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC090186.1-201ENST00000605991 572 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 U7.8-201ENST00000619968 63 ntBASIC3.8□□□□□ -1.8
ATP2A1O14983 AC091925.2-201ENST00000625059 256 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms