Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
SDCBPO00560 AC092447.6-201ENST00000414578 210 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.91□□□□□ -2.1
SDCBPO00560 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.91□□□□□ -2.1
SDCBPO00560 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.91□□□□□ -2.1
SDCBPO00560 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.91□□□□□ -2.1
SDCBPO00560 SNRPGP6-201ENST00000451124 220 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AL359385.1-201ENST00000456509 365 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AP001486.1-201ENST00000463339 476 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 SETP11-201ENST00000473027 690 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC023424.2-201ENST00000493479 777 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SDCBPO00560 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.91□□□□□ -2.1
SDCBPO00560 IGLV3-17-201ENST00000519099 244 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.91□□□□□ -2.1
SDCBPO00560 HIGD1AP6-201ENST00000521833 279 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 OR10V3P-201ENST00000525712 725 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.91□□□□□ -2.1
SDCBPO00560 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SDCBPO00560 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.91□□□□□ -2.1
SDCBPO00560 AC027176.1-201ENST00000560204 514 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC011471.1-201ENST00000585766 187 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.91□□□□□ -2.1
SDCBPO00560 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.91□□□□□ -2.1
SDCBPO00560 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.91□□□□□ -2.1
SDCBPO00560 NRBF2P5-201ENST00000603087 788 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 BX322635.1-201ENST00000605804 496 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC046143.2-201ENST00000609789 160 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AL353748.2-201ENST00000622148 471 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 MIR6766-201ENST00000622641 72 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC103798.2-201ENST00000624292 632 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.91□□□□□ -2.1
SDCBPO00560 CTSLP2-204ENST00000629029 392 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SDCBPO00560 Z82209.1-201ENST00000422141 2135 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SDCBPO00560 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SDCBPO00560 AC090740.1-201ENST00000623193 2262 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC026241.1-201ENST00000517873 2142 ntBASIC1.9□□□□□ -2.1
SDCBPO00560 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SDCBPO00560 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SDCBPO00560 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SDCBPO00560 SNORD51.1-201ENST00000365405 77 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 MIR493-201ENST00000385254 89 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 RNU6-821P-201ENST00000390995 107 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 RNU6-796P-201ENST00000391086 107 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SDCBPO00560 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.9□□□□□ -2.11
SDCBPO00560 ATF1P1-201ENST00000406040 927 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.9□□□□□ -2.11
SDCBPO00560 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.9□□□□□ -2.11
SDCBPO00560 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 MORF4L1P7-201ENST00000426038 703 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.9□□□□□ -2.11
SDCBPO00560 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.9□□□□□ -2.11
SDCBPO00560 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.9□□□□□ -2.11
SDCBPO00560 RPS15AP7-201ENST00000439294 405 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.9□□□□□ -2.11
SDCBPO00560 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.9□□□□□ -2.11
SDCBPO00560 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.9□□□□□ -2.11
SDCBPO00560 MLLT10P2-201ENST00000506434 249 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 CDC42P4-201ENST00000510507 563 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AC008716.1-201ENST00000511084 513 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.9□□□□□ -2.11
SDCBPO00560 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.9□□□□□ -2.11
SDCBPO00560 RN7SKP40-201ENST00000517211 242 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 RNU1-104P-201ENST00000517280 175 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.9□□□□□ -2.11
SDCBPO00560 AP001804.3-201ENST00000525146 880 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AP000790.1-201ENST00000528891 737 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.9□□□□□ -2.11
SDCBPO00560 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.9□□□□□ -2.11
SDCBPO00560 AL390838.2-201ENST00000602394 274 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AL020997.3-201ENST00000602843 359 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AC073968.1-201ENST00000618594 637 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AC025034.2-201ENST00000623264 286 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AC098679.5-201ENST00000624394 571 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.9□□□□□ -2.11
SDCBPO00560 MTCO1P18-201ENST00000455518 1419 ntBASIC1.9□□□□□ -2.11
SDCBPO00560 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SDCBPO00560 PABPC1P9-201ENST00000426076 1612 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.89□□□□□ -2.11
SDCBPO00560 SNORA67.1-201ENST00000364749 141 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 SNORD115-48-201ENST00000364764 76 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SDCBPO00560 AL356057.1-202ENST00000402263 756 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AL591416.1-201ENST00000404015 867 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 UBE2V1P9-201ENST00000414760 368 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC107081.1-201ENST00000414975 361 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 AL590623.1-201ENST00000427864 105 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 AL031659.1-201ENST00000447075 539 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 RPL23AP23-201ENST00000452590 471 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms