Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC85CA6NKD9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 MIR124-3-201ENST00000384866 87 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 MIR454-201ENST00000390180 115 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 RN7SKP17-201ENST00000411242 351 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 RPL30P16-201ENST00000419341 429 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 GTF2IP20-201ENST00000431663 360 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC090774.1-201ENST00000435925 246 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 RPL23AP52-201ENST00000439311 478 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 MTCO3P45-201ENST00000443036 613 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC117522.1-201ENST00000509821 380 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AF186190.1-201ENST00000517470 480 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 CBX3P5-201ENST00000552017 521 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC006363.1-201ENST00000603806 463 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 SNHG22-203ENST00000617833 660 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 MIR6839-201ENST00000620425 113 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 YWHAEP7-203ENST00000622054 312 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AC000095.2-202ENST00000637415 154 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AL365361.1-201ENST00000566942 3481 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 MTND5P17-201ENST00000418405 1603 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 AP000542.2-201ENST00000623199 6179 ntBASIC5.01□□□□□ -1.61
CCDC85CA6NKD9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 MAPK10-328ENST00000641553 4009 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 OR52B1P-201ENST00000316506 909 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 SNORA69-201ENST00000383895 132 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 RNU2-9P-201ENST00000410194 145 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 PPP1R11P2-201ENST00000423543 382 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 AL121601.2-201ENST00000438019 707 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 SNRPGP6-201ENST00000451124 220 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 PCBP2P3-201ENST00000509726 843 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC105417.1-201ENST00000514691 285 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 RNA5SP49-201ENST00000516450 115 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 Y_RNA.719-201ENST00000517156 106 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 FAM60DP-201ENST00000524174 632 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC034105.3-201ENST00000565294 442 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 XIAPP1-201ENST00000603162 600 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC010591.1-201ENST00000603941 649 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AL121992.2-201ENST00000606262 256 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC140113.4-201ENST00000622087 222 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 FRG1KP-201ENST00000623592 341 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 U6.105-201ENST00000637379 88 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 AC074029.4-201ENST00000624796 1859 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 AL391684.1-202ENST00000641293 1636 ntBASIC5□□□□□ -1.61
CCDC85CA6NKD9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC85CA6NKD9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC85CA6NKD9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC006020.1-201ENST00000420179 1854 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC004972.1-201ENST00000623934 2209 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC006206.1-201ENST00000544842 3387 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms