Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 AC107954.1-201ENST00000565906 727 ntBASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 LARP7P3-201ENST00000579888 337 ntBASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 AC079089.3-201ENST00000603094 673 ntBASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 HMGB1P24-202ENST00000615653 685 ntBASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 OR1S1-201ENST00000624470 978 ntBASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TCRBV3S1A0A5B6 SNORA1.3-201ENST00000384676 136 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AL031679.1-201ENST00000400616 525 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 BTF3P9-201ENST00000418784 283 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 OR4K11P-201ENST00000431829 904 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 ELOCP3-201ENST00000439303 348 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AL445687.1-201ENST00000439946 251 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 MTCYBP12-201ENST00000440559 1134 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 BUD31P2-201ENST00000449374 300 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 MORF4L1P4-201ENST00000450245 976 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC108120.2-201ENST00000512973 294 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC087272.1-201ENST00000523624 533 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AP002812.4-201ENST00000532139 286 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 TRAV28-201ENST00000557548 323 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 MIR6873-201ENST00000622788 63 ntBASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
TCRBV3S1A0A5B6 ZNF355P-201ENST00000427301 3216 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 RNU4-53P-201ENST00000410828 140 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 CYCSP32-201ENST00000440548 321 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 GPM6BP3-201ENST00000442797 145 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 snoU13.22-201ENST00000459428 104 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC007182.2-201ENST00000489251 402 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC021146.7-201ENST00000509604 775 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 ZNF92P3-201ENST00000596594 954 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC005000.2-201ENST00000605468 310 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC012150.2-201ENST00000621300 544 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC244517.12-201ENST00000623581 663 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 AC068880.5-201ENST00000624331 290 ntBASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TCRBV3S1A0A5B6 RNU6-461P-201ENST00000364195 107 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 SNORA67.3-201ENST00000384366 140 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 SNORA64-201ENST00000384674 134 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 RPL21P133-201ENST00000443666 476 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC009237.8-201ENST00000445492 379 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AL672167.3-201ENST00000465951 960 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC104689.1-201ENST00000473356 768 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 OR5H5P-201ENST00000503164 928 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 KLRA1P-201ENST00000503499 986 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 HMGB1P47-201ENST00000511281 589 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 SNORA31.23-201ENST00000517219 133 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 SNORA70.24-201ENST00000517233 118 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AP001317.1-201ENST00000531194 960 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC090897.2-201ENST00000581715 130 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 BNIP3P7-201ENST00000605641 516 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 MIR219B-201ENST00000637023 88 ntBASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
TCRBV3S1A0A5B6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms