Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RNA5SP38-201ENST00000410750 119 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC092447.6-201ENST00000414578 210 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 MRPS33P4-201ENST00000434892 317 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 HMGB1P48-201ENST00000446155 598 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC010285.1-201ENST00000470580 392 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 RPL23AP70-201ENST00000483361 460 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 NAMPTP2-201ENST00000505629 1115 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC105914.1-201ENST00000511798 226 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 TTC39CP1-201ENST00000512513 755 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 RNA5SP182-201ENST00000516064 82 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC022690.1-201ENST00000526681 550 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC019227.1-201ENST00000526902 510 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC011494.1-201ENST00000596454 237 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 ZNF92P3-201ENST00000596594 954 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AL022099.1-201ENST00000604551 712 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC008962.1-201ENST00000605729 304 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 AC011460.1-201ENST00000636268 1834 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AL139276.1-201ENST00000311910 1001 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 RNA5SP99-201ENST00000364020 114 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 SNORA67.1-201ENST00000364749 141 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 RPL26P37-201ENST00000411983 438 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 HMGB1P11-201ENST00000413899 637 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 MTCO3P30-201ENST00000426425 670 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC007677.1-201ENST00000445757 515 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 RNU1-104P-201ENST00000517280 175 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AP000790.1-201ENST00000528891 737 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC007115.1-201ENST00000546853 234 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 NOP56P3-201ENST00000549457 385 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC009977.1-201ENST00000586015 570 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC009220.3-201ENST00000604318 586 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 MIR6895-201ENST00000613497 78 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC008083.4-201ENST00000615076 444 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC026241.1-201ENST00000517873 2142 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 ZNF734P-201ENST00000419494 1534 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 MTND4P31-201ENST00000425607 1343 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 AC007336.1-201ENST00000576365 3828 ntBASIC1.85□□□□□ -2.11
TRAV17A0A0B4J275 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 RNU6-1159P-201ENST00000362933 107 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 RNU2-2P-201ENST00000410396 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AL606495.1-201ENST00000422100 813 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 RPL7P54-201ENST00000438336 674 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 SNORA31.20-201ENST00000517111 133 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 RN7SKP40-201ENST00000517211 242 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AP003717.3-201ENST00000544832 1180 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 PRELID2P1-201ENST00000552837 301 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC078814.3-201ENST00000553036 491 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC245036.5-201ENST00000596330 847 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.15-201ENST00000611544 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.16-201ENST00000613119 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.12-201ENST00000613778 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.20-201ENST00000613956 192 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.9-201ENST00000615427 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.11-201ENST00000616345 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.2-201ENST00000616535 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.3-201ENST00000617785 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.19-201ENST00000618602 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 RNU2-1-201ENST00000618664 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.6-201ENST00000619225 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.5-201ENST00000619465 191 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC092650.2-201ENST00000619984 902 ntBASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 U2.10-201ENST00000620268 191 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms