Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIR3200-201ENST00000580767 85 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AL137843.1-201ENST00000605078 385 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC090525.3-201ENST00000605601 189 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU6-156P-201ENST00000621869 107 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 MTND4P27-201ENST00000450813 1354 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU6-618P-201ENST00000363518 112 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AP002784.2-201ENST00000397300 549 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AL513477.1-202ENST00000417061 214 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 MTCO3P4-201ENST00000419236 787 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 IFNA20P-201ENST00000436840 528 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 RPL7P12-201ENST00000446719 750 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 OR6C72P-201ENST00000451403 892 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 FABP5P13-201ENST00000452144 328 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AC128713.1-201ENST00000471495 306 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AP001960.1-201ENST00000506494 658 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU6-1004P-201ENST00000516584 111 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 HSPE1P18-201ENST00000517602 280 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AC124283.4-201ENST00000581815 456 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AC008749.1-201ENST00000597650 306 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 RPAP2P1-201ENST00000603626 1168 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AL392048.1-201ENST00000613946 534 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 MFSD8-245ENST00000641743 948 ntBASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV1-2A0A0B4J238 MIR627-201ENST00000384979 97 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC019129.1-201ENST00000403786 261 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU2-17P-201ENST00000410290 190 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU4-72P-201ENST00000410754 173 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AL645568.3-201ENST00000433683 316 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC004866.2-201ENST00000438285 481 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 ATG12P2-201ENST00000456830 416 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 snoU13.7-201ENST00000459220 104 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 RPS29P11-201ENST00000496507 171 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 RPL38P4-201ENST00000502376 214 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC016065.2-201ENST00000514530 444 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 SNORA31.20-201ENST00000517111 133 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 IGKV2-36-201ENST00000519999 223 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 ERHP1-201ENST00000523006 310 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AP003717.3-201ENST00000544832 1180 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AL512310.1-201ENST00000548639 172 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 COX6CP3-201ENST00000580869 223 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC010928.2-201ENST00000588017 287 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 RPS15AP11-201ENST00000594193 385 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC092474.3-201ENST00000603022 568 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC068313.1-201ENST00000604028 1008 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 NF1P10-201ENST00000613227 742 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AL136981.2-201ENST00000617319 734 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 AC007998.5-201ENST00000622938 237 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 HSPA8P4-201ENST00000511877 1920 ntBASIC1.48□□□□□ -2.17
TRAV1-2A0A0B4J238 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 RN7SKP226-201ENST00000364912 300 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 SNORA46.1-201ENST00000391069 153 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AL079342.1-201ENST00000401460 267 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 POLHP1-201ENST00000411806 470 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AL356379.1-201ENST00000414105 126 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 RPL23AP39-201ENST00000415533 405 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 snoU13.3-201ENST00000459441 104 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU6-1308P-201ENST00000516817 103 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms