Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AP001025.1-201ENST00000486139 332 ntBASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 RPS23P1-201ENST00000491662 432 ntBASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 AC027667.1-201ENST00000545814 304 ntBASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 AC011476.5-201ENST00000615594 130 ntBASIC7.65□□□□□ -1.18
CCDC61Q9Y6R9 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.65□□□□□ -1.19
CCDC61Q9Y6R9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
CCDC61Q9Y6R9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CCDC61Q9Y6R9 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
CCDC61Q9Y6R9 AC008568.2-201ENST00000623862 2313 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 ZNF658B-201ENST00000602828 3408 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-270P-201ENST00000364131 105 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-371P-201ENST00000364283 108 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 RNY4P18-201ENST00000391107 89 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 HSPE1P8-201ENST00000406997 288 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 AC017078.1-201ENST00000416146 368 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 RPS23P10-201ENST00000416185 486 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 RNF10P1-201ENST00000418589 369 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 PSMD10P3-201ENST00000437000 448 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 AC004938.1-201ENST00000438468 308 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 RPL26P6-201ENST00000440913 438 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 BX284632.1-201ENST00000478218 541 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 RNU6-1234P-201ENST00000516877 103 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 AC005725.1-201ENST00000577346 2607 ntBASIC7.64□□□□□ -1.19
CCDC61Q9Y6R9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 RNU4-84P-201ENST00000364200 139 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 SNORA16A-201ENST00000384342 137 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 TMSB10P2-201ENST00000416049 131 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 AC069213.2-201ENST00000420238 366 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 MTND4LP9-201ENST00000427694 174 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 RPS4XP22-201ENST00000480755 780 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 RPL30P11-201ENST00000495304 339 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 SNRPCP2-201ENST00000504370 475 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 EIF4A2P5-201ENST00000529914 499 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 AC083843.3-201ENST00000623679 2186 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 AC022164.1-201ENST00000568767 2673 ntBASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CCDC61Q9Y6R9 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 RNU1-106P-201ENST00000384382 164 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AL590762.4-201ENST00000425885 253 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 RPL12P17-201ENST00000432393 498 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 AL357134.1-201ENST00000445848 426 ntBASIC7.62□□□□□ -1.19
CCDC61Q9Y6R9 Z95327.1-201ENST00000446082 482 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms