Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RSU1P2-202ENST00000437884 485 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 SDCBPP1-201ENST00000440192 890 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL356535.1-201ENST00000440335 398 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AP000542.1-201ENST00000448473 371 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 BX276092.4-201ENST00000452056 248 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 BTF3P5-201ENST00000457252 467 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC023424.2-201ENST00000493479 777 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 MTND2P33-201ENST00000506452 1031 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 TXNP6-201ENST00000510190 310 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC016065.2-201ENST00000514530 444 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 RNA5SP208-201ENST00000516156 78 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC068446.3-201ENST00000555285 382 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL137849.1-201ENST00000604767 169 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 RBM11P1-201ENST00000604951 799 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 SNORA62.6-201ENST00000606322 83 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC091834.1-201ENST00000614543 472 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC079684.1-201ENST00000621405 437 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 SEPT14P19-203ENST00000633205 211 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AP004289.2-201ENST00000444413 1457 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 MIR1289-1-201ENST00000408836 144 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RPS3AP3-201ENST00000411933 242 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RPL31P2-201ENST00000413849 377 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AL591419.1-201ENST00000427423 339 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AL022238.1-201ENST00000442557 355 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 MTND1P1-201ENST00000445453 368 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RPL7P52-201ENST00000449200 742 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC098824.1-201ENST00000453565 980 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 BX510359.1-201ENST00000456973 237 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC093899.1-201ENST00000457984 376 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 snoU13.8-201ENST00000458890 104 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RPL32P34-201ENST00000486380 400 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 HMGB1P36-201ENST00000487709 576 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 TRBV12-2-201ENST00000489763 344 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 HMGB1P21-201ENST00000502313 581 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RPL37P25-201ENST00000507308 276 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 SNORA18.6-201ENST00000516792 115 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RN7SKP277-201ENST00000516895 283 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 SUMO2P20-201ENST00000520803 283 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 DEFB108A-201ENST00000530110 222 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC084757.1-201ENST00000559987 490 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 MIR3682-201ENST00000581338 84 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 YWHAQP7-201ENST00000603536 658 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 BCRP9-201ENST00000605312 388 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AL390208.1-201ENST00000605885 644 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC098614.4-201ENST00000607601 462 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 AC072046.2-201ENST00000618366 268 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 RMST_9.1-201ENST00000619945 193 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 MIR4496-201ENST00000635896 61 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 MAPK10-372ENST00000641954 3413 ntBASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAI2Q9Y5P3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms