Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC083899.1-201ENST00000454465 3819 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC097063.1-201ENST00000426714 1797 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 RNY1-201ENST00000364228 113 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU6-1303P-201ENST00000364841 107 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 RNA5SP240-201ENST00000365355 128 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU6-611P-201ENST00000384276 104 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU6-45P-201ENST00000384471 107 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 RPS12P5-201ENST00000423449 371 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 UBE2D3P2-201ENST00000424409 445 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 CEACAMP6-201ENST00000452007 574 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC008481.1-201ENST00000463278 396 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC109329.1-201ENST00000518744 317 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC126177.5-201ENST00000549599 178 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR548AI-201ENST00000579940 88 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR3176-201ENST00000582210 90 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR4273-201ENST00000582824 84 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC012669.1-201ENST00000603209 283 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AL355877.2-201ENST00000603670 358 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR6133-201ENST00000617057 108 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC109583.2-201ENST00000617367 129 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 uc_338.7-201ENST00000621834 124 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC100757.1-201ENST00000616872 1835 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 AC016745.2-201ENST00000608834 3443 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 IRF5P1-201ENST00000504852 2164 ntBASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGC4Q9Y5F7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 RNA5SP453-201ENST00000362503 119 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 Y_RNA.84-201ENST00000363011 104 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 Y_RNA.183-201ENST00000363882 113 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 Y_RNA.237-201ENST00000364439 102 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU6-125P-201ENST00000384505 107 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 RPS23P10-201ENST00000416185 486 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AL354868.1-201ENST00000417077 482 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AC010655.1-201ENST00000449336 292 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AC091180.1-201ENST00000462104 372 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AC010631.1-201ENST00000474150 156 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 RPS4XP1-201ENST00000482189 787 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU4-71P-201ENST00000516258 113 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 Y_RNA.687-201ENST00000516558 91 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 IGLV2-28-201ENST00000520681 304 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 HMGB1P40-201ENST00000525121 540 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AC009852.2-201ENST00000567898 485 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AC006023.2-201ENST00000609916 167 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR1244-1-201ENST00000612829 85 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 TUG1_2.1-201ENST00000614234 87 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR6864-201ENST00000617935 70 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR1244-3-201ENST00000635744 85 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR1244-2-201ENST00000636449 85 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR1244-4-202ENST00000636813 85 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 AC116667.1-201ENST00000604855 2072 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 PROS2P-201ENST00000474651 1951 ntBASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDHGC4Q9Y5F7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGC4Q9Y5F7 AL078621.3-201ENST00000623707 2042 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms