Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC006065.5-201ENST00000623427 349 ntBASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHB1Q9Y5F3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 Y_RNA.70-201ENST00000362886 110 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 RN7SKP280-201ENST00000364196 304 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 RNA5SP366-201ENST00000365454 123 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 MIR124-3-201ENST00000384866 87 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL445189.1-201ENST00000405722 338 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-712P-201ENST00000410558 100 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL109913.1-201ENST00000421173 514 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 HMGB1P31-201ENST00000437242 427 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 NFU1P2-201ENST00000448700 469 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 DHFRP3-201ENST00000455595 559 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 RPL36AP13-201ENST00000457490 317 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC041039.1-201ENST00000485656 536 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 RPL36AP51-201ENST00000487216 318 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC069439.1-201ENST00000494739 167 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC068305.1-201ENST00000497406 726 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC098799.2-201ENST00000509466 868 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 RNA5SP360-201ENST00000516555 118 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AP003730.1-201ENST00000524605 285 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 ADI1P3-201ENST00000549509 470 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC091135.1-201ENST00000585943 307 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC105224.1-201ENST00000587055 421 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AP001429.1-201ENST00000602568 530 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL136363.1-201ENST00000605349 337 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 MIR6130-201ENST00000619419 109 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 AC244100.1-202ENST00000621554 382 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 MIR3653-201ENST00000625572 110 ntBASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB1Q9Y5F3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 SNORD56.2-201ENST00000363242 71 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-483P-201ENST00000384088 108 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 RNU6-780P-201ENST00000391030 104 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 RPS4XP8-201ENST00000402039 771 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 MIR1911-201ENST00000410783 80 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 SNRPFP1-201ENST00000414761 252 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC099677.1-201ENST00000420575 175 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 BTF3P10-201ENST00000433415 495 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 RPS26P28-201ENST00000470806 348 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 RPS3AP50-201ENST00000487064 803 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC135721.1-201ENST00000497954 479 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 PARP4P3-201ENST00000510265 317 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 Y_RNA.704-201ENST00000516851 102 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 DEFB108D-201ENST00000527787 222 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 OR4R1P-201ENST00000529879 463 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms