Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC008013.2-202ENST00000637965 364 ntBASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 MTND4P23-201ENST00000447723 1363 ntBASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 AC138915.3-201ENST00000562908 1389 ntBASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 AC092326.2-201ENST00000624772 1561 ntBASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 MTND5P3-201ENST00000438536 1800 ntBASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 EOGT-210ENST00000615922 1931 ntBASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CTDP1Q9Y5B0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RNA5SP22-201ENST00000365393 109 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-441P-201ENST00000384545 106 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 MIR649-201ENST00000384843 97 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 SNORA48.7-201ENST00000391302 135 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 DSTNP4-201ENST00000399472 474 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 EIF5P1-201ENST00000400019 1231 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AL031679.1-201ENST00000400616 525 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AL356776.1-201ENST00000406574 447 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RN7SKP202-201ENST00000410439 330 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RNU2-8P-201ENST00000410727 190 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AP000542.1-201ENST00000448473 371 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 MTND1P12-201ENST00000455231 147 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RPL37P6-202ENST00000464216 403 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RPL23AP2-201ENST00000471227 466 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC020593.1-201ENST00000507399 299 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-1281P-201ENST00000516223 105 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 RNU4-60P-201ENST00000517239 135 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AF235103.2-201ENST00000525753 346 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 OR8L1P-201ENST00000534005 955 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC123904.3-201ENST00000547218 814 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC124068.1-201ENST00000563131 678 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC107954.1-201ENST00000565906 727 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 AL391646.1-201ENST00000603860 190 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.84□□□□□ -1.63
CTDP1Q9Y5B0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.84□□□□□ -1.64
CTDP1Q9Y5B0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.84□□□□□ -1.64
CTDP1Q9Y5B0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 RNA5SP167-201ENST00000365461 116 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 MIR134-201ENST00000385258 73 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 MRPL42P2-201ENST00000403169 426 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AL023807.1-201ENST00000407932 359 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC127391.1-201ENST00000411737 98 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 EIF4EP1-201ENST00000422311 642 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC002381.1-201ENST00000447049 280 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC132479.1-201ENST00000449160 144 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC110792.1-201ENST00000491826 472 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC078817.1-201ENST00000492623 435 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC090453.1-201ENST00000495560 436 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 HMGN1P12-201ENST00000499125 195 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC114967.1-201ENST00000504890 259 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 HSPA8P13-201ENST00000523715 472 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 ZNF705CP-201ENST00000530515 889 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 CBX3P5-201ENST00000552017 521 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 LSM6P2-201ENST00000552208 177 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms