Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 Y_RNA.31-201ENST00000362574 102 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RN7SKP115-201ENST00000363177 317 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 SNORD115-7-201ENST00000365306 82 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RNU5E-6P-201ENST00000365574 115 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RNA5SP397-201ENST00000391323 118 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RNU6-370P-201ENST00000411008 104 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RPL37P10-201ENST00000412884 288 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 PMCHL1-202ENST00000423102 261 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RPL23AP38-201ENST00000423801 469 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC020550.1-201ENST00000447385 163 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC073264.2-201ENST00000448886 166 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RPS17P13-201ENST00000448974 407 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 CEACAMP6-201ENST00000452007 574 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC106872.2-201ENST00000494303 480 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RN7SKP46-201ENST00000515942 234 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RNU6-566P-201ENST00000516790 107 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RNU6-273P-201ENST00000516937 96 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 RNU6-64P-201ENST00000517119 105 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 IGLVIV-53-201ENST00000520107 367 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AL137161.1-201ENST00000532231 390 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 SNRPGP18-201ENST00000553000 214 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 uc_338.22-201ENST00000622722 187 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC025034.2-201ENST00000623264 286 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC244517.12-201ENST00000623581 663 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 AC091925.2-201ENST00000625059 256 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 MTND5P1-201ENST00000445440 1375 ntBASIC5.29□□□□□ -1.56
PCDHA4Q9UN74 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC021146.4-201ENST00000309229 279 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 Y_RNA.133-201ENST00000363428 110 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 SNORD113-7-201ENST00000363762 77 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 RNVU1-3-201ENST00000364313 161 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 RNU6-1078P-201ENST00000364522 103 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 SNORA71.2-201ENST00000364941 134 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 SNORA70F-201ENST00000384142 135 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 UBE2V1P2-201ENST00000397758 440 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 MIR1271-201ENST00000408537 86 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC114491.1-201ENST00000416095 246 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 Z74021.1-201ENST00000423610 407 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 IPO7P1-201ENST00000442031 636 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 RPL32P28-201ENST00000443577 397 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 HMGB3P22-202ENST00000451823 572 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 RPL36AP13-201ENST00000457490 317 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 RPL39P5-202ENST00000512505 151 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 RNU6-27P-201ENST00000516146 107 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC022634.1-201ENST00000520765 532 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 XIAPP1-201ENST00000603162 600 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 Z82243.1-201ENST00000609432 473 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC104260.2-201ENST00000623551 3497 ntBASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHA4Q9UN74 AC009951.1-201ENST00000623674 2614 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC108751.5-201ENST00000492880 1336 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 AC079741.1-201ENST00000321498 212 ntBASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHA4Q9UN74 RNU6-82P-201ENST00000363970 107 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms