Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 RNU5E-5P-201ENST00000365379 116 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 SUGT1P1-201ENST00000379514 476 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 Y_RNA.445-201ENST00000384168 102 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AL590290.1-201ENST00000405336 380 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 Y_RNA.598-201ENST00000410480 95 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 MIR1911-201ENST00000410783 80 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 JKAMPP1-201ENST00000413804 919 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC083875.1-201ENST00000419509 405 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC008267.5-201ENST00000424928 265 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 GTF2IP13-201ENST00000438487 386 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC091544.1-201ENST00000484702 348 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 RNU6-1137P-201ENST00000517073 99 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 RNA5SP179-201ENST00000517284 121 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 MIR4307-201ENST00000582802 84 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AC018638.8-201ENST00000588755 281 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 AP004247.3-201ENST00000608682 624 ntBASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL17A1Q9UMD9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 EOGT-210ENST00000615922 1931 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AL359854.1-201ENST00000614203 1594 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AL031985.3-201ENST00000565390 2449 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 Y_RNA.25-201ENST00000362528 102 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 RNU6-462P-201ENST00000362659 105 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 Y_RNA.384-201ENST00000383909 102 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 FCF1P2-201ENST00000415284 583 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 CALM1P1-201ENST00000442082 433 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 RPS27AP15-201ENST00000447672 466 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AL135752.1-201ENST00000479477 471 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC093809.1-201ENST00000509155 340 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC021146.1-201ENST00000511202 716 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 RPL7L1P13-201ENST00000511702 739 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC114797.1-201ENST00000514003 728 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 MTND5P4-201ENST00000514978 288 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 RNU7-30P-201ENST00000516835 62 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 DEFB109D-201ENST00000529497 240 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 SLC2A13P1-201ENST00000531560 322 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC012493.2-201ENST00000595083 291 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC091167.4-201ENST00000605079 184 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AL157817.1-201ENST00000614264 790 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 MIR8058-201ENST00000615737 89 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 AC107021.2-201ENST00000567714 2095 ntBASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL17A1Q9UMD9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 Y_RNA.259-201ENST00000364619 101 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AL450338.1-201ENST00000407987 512 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 OR9R1P-201ENST00000412200 877 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC005300.1-201ENST00000428401 373 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC005326.1-201ENST00000429197 123 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 HMGB3P10-201ENST00000434734 572 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 MTATP8P1-201ENST00000467115 207 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC068781.1-201ENST00000488231 618 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 HMGB1P28-201ENST00000507778 552 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 Y_RNA.693-201ENST00000516641 110 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 RNU6-1261P-201ENST00000517194 104 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC136618.2-201ENST00000575091 400 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC006270.2-201ENST00000578523 652 ntBASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.06□□□□□ -1.44
COL17A1Q9UMD9 AC018462.2-201ENST00000605375 395 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms