Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 RNU4-56P-201ENST00000364700 142 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 MIR539-201ENST00000365690 78 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 SNORA46.1-201ENST00000391069 153 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 AC063979.1-201ENST00000415539 377 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 MTATP6P4-201ENST00000427725 675 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 AL133244.1-201ENST00000456007 258 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 AC104339.1-201ENST00000465478 348 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 RPL21P6-201ENST00000479171 504 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 RNU6-347P-201ENST00000516658 105 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 EDDM3DP-201ENST00000554692 434 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 uc_338.26-201ENST00000612659 160 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 AC099506.2-201ENST00000623074 221 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 PWAR1-201ENST00000624188 2414 ntBASIC6.06□□□□□ -1.44
TSR3Q9UJK0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.06□□□□□ -1.44
TSR3Q9UJK0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 RNU6-653P-201ENST00000363074 106 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 Y_RNA.412-201ENST00000384001 104 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 Y_RNA.446-201ENST00000384178 104 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 RNU6-429P-201ENST00000384582 108 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 RNU6-1179P-201ENST00000384667 107 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 AL096701.2-201ENST00000416920 238 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 AL596266.1-201ENST00000448132 400 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 HMGB3P3-201ENST00000510526 400 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 RNU1-86P-201ENST00000516108 154 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 RNU1-107P-201ENST00000516617 154 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 CR383656.7-201ENST00000548164 174 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 MIR4675-201ENST00000577898 77 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 B3GNTL1P2-201ENST00000603673 288 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 MIR6889-201ENST00000613185 59 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 MIR6721-201ENST00000617181 87 ntBASIC6.05□□□□□ -1.44
TSR3Q9UJK0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.05□□□□□ -1.44
TSR3Q9UJK0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AL359955.1-201ENST00000455242 3275 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 RNA5SP110-201ENST00000362638 115 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 RNU6-270P-201ENST00000364131 105 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 RN7SKP227-201ENST00000364445 330 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 SNORA20-201ENST00000384662 132 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 THEM7P-201ENST00000419556 672 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AC108479.1-201ENST00000431142 427 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 CFL1P1-202ENST00000432948 411 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 USP9YP7-201ENST00000436723 430 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 HIGD1AP2-201ENST00000446367 280 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AC073587.1-201ENST00000447093 876 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 USP9YP32-201ENST00000452432 430 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 TOMM22P6-201ENST00000465035 409 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AC022795.1-201ENST00000473808 480 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AP002453.1-201ENST00000492327 668 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 SNORA25.12-201ENST00000516202 82 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 SNORA74.1-201ENST00000516320 180 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AK6P2-201ENST00000549020 471 ntBASIC6.04□□□□□ -1.44
TSR3Q9UJK0 AC007494.1-201ENST00000562293 760 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms