Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP25Q9UHP3 FAM92A1P2-202ENST00000504766 877 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC005921.1-201ENST00000510589 286 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC074344.1-201ENST00000512823 224 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 RNU7-143P-201ENST00000516781 65 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AP003467.2-201ENST00000520175 319 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 CR383656.7-201ENST00000548164 174 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC022655.2-201ENST00000577280 318 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC008745.1-201ENST00000604064 271 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC104458.1-201ENST00000608243 463 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC092954.2-201ENST00000609103 430 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AL158209.2-201ENST00000619266 216 ntBASIC4.64□□□□□ -1.67
USP25Q9UHP3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP25Q9UHP3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP25Q9UHP3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.64□□□□□ -1.67
USP25Q9UHP3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP25Q9UHP3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP25Q9UHP3 IPO8P1-201ENST00000455509 3109 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 FARSBP1-201ENST00000435808 1778 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP25Q9UHP3 RNA5SP366-201ENST00000365454 123 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 RNU6-359P-201ENST00000365466 108 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 MIR1183-201ENST00000408856 89 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 BTF3P10-201ENST00000433415 495 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC091390.1-201ENST00000433904 331 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 Z99127.3-201ENST00000448158 395 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP25Q9UHP3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 FABP3P2-201ENST00000453169 399 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC034222.1-201ENST00000494052 532 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC112204.1-201ENST00000502591 103 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC093824.1-201ENST00000508796 343 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC018630.1-201ENST00000541376 925 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 RPL23AP87-202ENST00000573039 466 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 SNORD84-203ENST00000584275 78 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 AC091965.4-201ENST00000607691 587 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 AL359880.1-201ENST00000621879 266 ntBASIC4.63□□□□□ -1.67
USP25Q9UHP3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP25Q9UHP3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP25Q9UHP3 AP002001.2-201ENST00000529025 1469 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP25Q9UHP3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP25Q9UHP3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP25Q9UHP3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP25Q9UHP3 RNU1-18P-201ENST00000363062 164 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 SNORA62-201ENST00000365493 153 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP25Q9UHP3 RNU6-1207P-201ENST00000384343 107 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 RNU6-114P-201ENST00000384704 105 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 FGF7P8-201ENST00000402994 292 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AL137014.1-201ENST00000420490 1226 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AL445669.1-201ENST00000426743 755 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC068287.1-201ENST00000430283 295 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC009961.2-201ENST00000435771 251 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 HMGB1P31-201ENST00000437242 427 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 CBX1P1-201ENST00000440184 427 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC006011.1-201ENST00000442758 349 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC112653.1-201ENST00000443851 386 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AP000542.1-201ENST00000448473 371 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 GAPDHP17-201ENST00000449858 1001 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 RN7SL385P-201ENST00000468873 276 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 RN7SL303P-201ENST00000469773 251 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 AF213884.1-201ENST00000488102 463 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC013356.1-201ENST00000489027 564 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 RPL29P14-201ENST00000495837 428 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 HMGB1P29-201ENST00000505659 499 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 ARL2BPP6-201ENST00000512757 439 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 SNORA31.20-201ENST00000517111 133 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms