Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC007496.3-201ENST00000624987 3443 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 RNU6-173P-201ENST00000364215 104 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL365184.2-201ENST00000431139 435 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 OR4K11P-201ENST00000431829 904 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 UBE2V1P13-201ENST00000436983 439 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC004866.2-201ENST00000438285 481 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL512286.1-201ENST00000439244 400 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 RPL7P36-201ENST00000444633 681 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 HMGN2P7-201ENST00000456186 273 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 RPL23AP67-201ENST00000465341 474 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 RN7SL132P-201ENST00000478131 296 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC006499.5-201ENST00000505037 514 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC010486.3-201ENST00000511602 785 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC106038.2-201ENST00000520706 568 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 UBE2L4-201ENST00000587688 464 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 Z99497.2-201ENST00000603634 310 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AP001330.4-201ENST00000604350 154 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL158211.4-201ENST00000606988 584 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC091965.4-201ENST00000607691 587 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL355810.1-201ENST00000614629 552 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL158801.5-201ENST00000623123 465 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC091931.1-201ENST00000623488 728 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC079597.1-201ENST00000624306 508 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC048347.1-201ENST00000624621 427 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 MIR3974-201ENST00000637126 96 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AL133383.2-201ENST00000622958 2336 ntBASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LIMA1Q9UHB6 AC017071.1-201ENST00000564407 2204 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 RNU5F-6P-201ENST00000362979 116 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 RNU4-40P-201ENST00000364351 143 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 RN7SKP227-201ENST00000364445 330 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 RPS3AP24-201ENST00000407896 734 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AL359704.1-201ENST00000411586 781 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 Z99755.1-201ENST00000414048 380 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AL356968.1-201ENST00000416622 474 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC009518.2-201ENST00000418056 731 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AL389915.1-201ENST00000422463 466 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC004975.1-201ENST00000428733 208 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 MED14P1-201ENST00000430517 648 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 RPL37P21-201ENST00000435890 276 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 THAP5P1-201ENST00000439089 262 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 MTND1P30-201ENST00000441241 901 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC008264.1-201ENST00000447612 367 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 MTND1P9-201ENST00000453775 944 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 RPL23AP31-201ENST00000456160 467 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 HMGN1P18-201ENST00000457642 277 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 NPM1P41-201ENST00000512920 831 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC104027.1-201ENST00000521887 300 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 MIR4697-201ENST00000582977 78 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC006116.10-201ENST00000591836 581 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AP001429.1-201ENST00000602568 530 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC012443.1-201ENST00000605605 231 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC092354.1-201ENST00000606057 376 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 AC093783.1-201ENST00000612976 329 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 MIR6810-201ENST00000622701 70 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 PABPC1P9-201ENST00000426076 1612 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 TAB3P1-202ENST00000452645 1634 ntBASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIMA1Q9UHB6 CCT4P2-201ENST00000233836 1548 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AL356274.2-201ENST00000624379 3752 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC009902.3-201ENST00000606235 2172 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms