Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 RNU6-839P-201ENST00000363347 108 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AL035405.1-201ENST00000400795 710 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC069282.1-201ENST00000411911 526 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 BX682237.1-201ENST00000415016 335 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 RPL7P30-201ENST00000420888 709 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 RPL27AP8-201ENST00000424277 446 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 C1DP1-201ENST00000426049 402 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 Z93242.1-201ENST00000427102 353 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC004866.2-201ENST00000438285 481 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 NDUFA5P7-201ENST00000452914 242 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AL359385.1-201ENST00000456509 365 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 PABPC1P3-201ENST00000469174 459 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 RN7SL633P-201ENST00000488974 297 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC084024.2-201ENST00000503480 791 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 SEM1P1-201ENST00000506694 209 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC090136.1-201ENST00000520009 240 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 CYCSP39-201ENST00000565821 309 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC006504.3-201ENST00000586818 523 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC079089.3-201ENST00000603094 673 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 HSPE1P7-201ENST00000604681 321 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AL512427.1-201ENST00000618593 349 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 AP000943.4-201ENST00000622912 357 ntBASIC2.74□□□□□ -1.97
CTSFQ9UBX1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CTSFQ9UBX1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 RNU6-251P-201ENST00000363235 104 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 SNORA5B-201ENST00000363786 132 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 RNU6-115P-201ENST00000364310 107 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 RNU6-657P-201ENST00000383904 107 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AL121978.1-201ENST00000402778 359 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 RNU2-25P-201ENST00000411041 191 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 RAC1P8-201ENST00000427086 527 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 MTND4LP10-201ENST00000435146 291 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC093156.1-201ENST00000440382 670 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AL162389.1-201ENST00000449233 177 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 UQCRHP3-201ENST00000451503 251 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AL049829.1-201ENST00000465411 156 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 snoZ278.1-201ENST00000517059 112 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC023632.1-201ENST00000518463 375 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 OR4P1P-201ENST00000530808 1136 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC107016.2-201ENST00000547968 190 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 EEF1B2P4-201ENST00000551398 348 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 GTF3AP2-201ENST00000557014 266 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC044913.1-201ENST00000557200 430 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AC010738.1-201ENST00000604970 987 ntBASIC2.73□□□□□ -1.97
CTSFQ9UBX1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.73□□□□□ -1.97
CTSFQ9UBX1 AL035425.3-201ENST00000564206 4996 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 RNU6-851P-201ENST00000384565 107 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AL136372.1-201ENST00000403060 228 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 BTF3P8-201ENST00000414577 526 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 BOLA3P4-201ENST00000418151 400 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 ARF4P4-201ENST00000439608 520 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AL589880.1-201ENST00000448271 287 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 GSTA11P-201ENST00000452866 669 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 MRPL42P4-201ENST00000453267 443 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CTSFQ9UBX1 RNA5SP367-201ENST00000516557 118 ntBASIC2.72□□□□□ -1.97
CTSFQ9UBX1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms