Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL645937.1-202ENST00000421799 937 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 DUTP6-201ENST00000425573 462 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 MTATP6P16-201ENST00000434543 526 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 MRPL50P4-201ENST00000446432 475 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC006480.1-201ENST00000449887 378 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 SCARNA10-201ENST00000459255 330 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC007547.1-201ENST00000462177 490 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 MRPS17P3-201ENST00000465453 385 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 RPS29P22-201ENST00000472363 168 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC022795.1-201ENST00000473808 480 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 RPL12P20-201ENST00000475538 479 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC007016.1-201ENST00000512110 244 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC005798.1-201ENST00000513715 387 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 RNU6-798P-201ENST00000516912 103 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 HMGN1P28-201ENST00000521340 364 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AP006289.1-201ENST00000538089 277 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 RPL21P7-201ENST00000557463 483 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC005668.1-201ENST00000571142 476 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC093838.1-201ENST00000613014 469 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 AC126177.8-201ENST00000618339 1015 ntBASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.78□□□□□ -1.64
PPARGC1AQ9UBK2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 MAPK10-286ENST00000641208 8747 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 FRG1CP-201ENST00000358464 769 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 SNORD113.2-201ENST00000364166 89 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 SNORA71.2-201ENST00000364941 134 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 MIR153-1-201ENST00000384914 90 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-821P-201ENST00000390995 107 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-754P-201ENST00000391166 107 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AL136372.1-201ENST00000403060 228 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AL122016.1-201ENST00000403365 367 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-516P-201ENST00000411381 104 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 MTCYBP8-201ENST00000422855 651 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 PSMA2P3-201ENST00000429685 675 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AL138799.3-201ENST00000438968 350 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 TPT1P13-201ENST00000449760 499 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 MTND3P16-201ENST00000452205 344 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 ISCUP1-201ENST00000454451 448 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 SNORD97-201ENST00000459187 142 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RPL7L1P8-201ENST00000469911 741 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RPS23P1-201ENST00000491662 432 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 Y_RNA.691-201ENST00000516611 103 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RN7SKP234-201ENST00000517173 224 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC107953.1-201ENST00000522216 297 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 PSMA2P1-201ENST00000526365 646 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC093027.1-201ENST00000546698 429 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC015912.2-201ENST00000571053 181 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 MIR4775-201ENST00000581168 75 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC005498.1-201ENST00000592125 465 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-89P-201ENST00000606519 100 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AL022345.1-201ENST00000607292 135 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 MIR1302-1-201ENST00000637932 143 ntBASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PPARGC1AQ9UBK2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-641P-201ENST00000384006 107 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 MIR585-201ENST00000384887 94 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 MT-TC-201ENST00000387405 66 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 RNU4-26P-201ENST00000410270 107 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CYCSP10-201ENST00000417973 294 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 OR1AA1P-201ENST00000419597 916 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 PPIAP3-201ENST00000450588 505 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CEACAMP6-201ENST00000452007 574 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms