Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.39□□□□□ -2.03
PHRF1Q9P1Y6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.39□□□□□ -2.03
PHRF1Q9P1Y6 AC090953.1-201ENST00000604305 1092 ntBASIC2.39□□□□□ -2.03
PHRF1Q9P1Y6 ELOCP34-201ENST00000604436 327 ntBASIC2.39□□□□□ -2.03
PHRF1Q9P1Y6 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 RNU6-392P-201ENST00000364926 101 ntBASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 RPS7P9-201ENST00000414704 586 ntBASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 AC009238.1-201ENST00000442165 424 ntBASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 AC009237.6-201ENST00000446969 424 ntBASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 AC124283.4-201ENST00000581815 456 ntBASIC2.38□□□□□ -2.03
PHRF1Q9P1Y6 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 TOMM22P1-201ENST00000418578 312 ntBASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 MTND4LP13-201ENST00000425022 298 ntBASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 DNAJC19P4-201ENST00000440115 345 ntBASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 BX322784.1-201ENST00000455793 1077 ntBASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 OR8X1P-201ENST00000534542 869 ntBASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 AC010200.2-201ENST00000605098 235 ntBASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PHRF1Q9P1Y6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 RNU6-1331P-201ENST00000363658 106 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 RNU6-603P-201ENST00000411403 107 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 AC099336.2-201ENST00000422457 254 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 AC244033.1-201ENST00000426826 870 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 AC093392.2-201ENST00000450682 337 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 MTND4LP22-201ENST00000508209 276 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 MTCO1P6-201ENST00000481192 1384 ntBASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
PHRF1Q9P1Y6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AL590084.1-201ENST00000407885 387 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC022022.1-201ENST00000430304 178 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 TVP23BP2-201ENST00000455082 615 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 RPL5P13-201ENST00000462840 709 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AP002371.1-201ENST00000463604 433 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC090453.1-201ENST00000495560 436 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 PTP4A1P6-201ENST00000531034 478 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 MIR4512-201ENST00000583257 77 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC012360.2-201ENST00000609349 391 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC009318.3-201ENST00000616916 503 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 MTND4P1-201ENST00000457501 1466 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AL118496.1-201ENST00000440201 1812 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 RNU6-707P-201ENST00000364647 95 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC093084.1-201ENST00000424233 687 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 RNA5SP480-201ENST00000516840 109 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC123786.2-201ENST00000603459 275 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AL035411.2-201ENST00000604022 421 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 MIR6504-201ENST00000613520 61 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AP003072.5-201ENST00000623872 773 ntBASIC2.35□□□□□ -2.03
PHRF1Q9P1Y6 AC110774.1-201ENST00000623567 2018 ntBASIC2.34□□□□□ -2.03
PHRF1Q9P1Y6 RNU6-233P-201ENST00000410845 141 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 WARS2P1-201ENST00000429678 537 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 MTND2P2-201ENST00000434633 945 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 OR51B8P-201ENST00000449892 769 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 AC111000.5-201ENST00000506559 1178 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 AC103987.3-201ENST00000582071 292 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 uc_338.5-201ENST00000611839 155 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 RMST_2.1-201ENST00000617263 136 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 AC106730.3-201ENST00000624568 641 ntBASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
PHRF1Q9P1Y6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms