Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL513477.1-202ENST00000417061 214 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC099677.1-201ENST00000420575 175 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 SFR1P2-201ENST00000421841 730 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 ARL5AP4-201ENST00000430731 512 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AP000949.1-201ENST00000438328 629 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 LSM1P1-201ENST00000438629 273 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RPL32P28-201ENST00000443577 397 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 COX6CP2-201ENST00000444980 225 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC093801.2-201ENST00000503966 1050 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 SEM1P1-201ENST00000506694 209 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC098799.2-201ENST00000509466 868 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 MTCO3P44-201ENST00000510977 541 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RNA5SP135-201ENST00000517019 125 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AP000790.1-201ENST00000528891 737 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC009097.3-201ENST00000563557 1018 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 MIR3945-201ENST00000581853 98 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 MIR4435-1-201ENST00000582552 80 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC025588.3-201ENST00000604182 274 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC116312.1-201ENST00000606841 314 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC090115.4-201ENST00000609970 188 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC013412.1-201ENST00000610687 192 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 MTND2P41-201ENST00000637599 773 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AC092593.1-201ENST00000515413 1815 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 DBF4P1-201ENST00000412976 1892 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 OR1L1-202ENST00000373686 1083 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 SNORD21-201ENST00000383953 95 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 MIR649-201ENST00000384843 97 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AL035405.1-201ENST00000400795 710 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 HMGN2P35-201ENST00000412164 270 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 ARF4P4-201ENST00000439608 520 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC092902.1-201ENST00000486999 259 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC091860.1-201ENST00000505723 432 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC096725.1-201ENST00000514266 313 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 SNORA31.21-201ENST00000517180 77 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 NIFKP8-201ENST00000560500 874 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC018926.1-201ENST00000616335 435 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 VN1R7P-201ENST00000619242 903 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 AC006927.2-201ENST00000639256 389 ntBASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC10Q9NYD6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 RNU5B-1-201ENST00000363286 116 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 RNA5SP68-201ENST00000363885 119 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 MTND4P13-201ENST00000402078 1023 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 MTND4LP20-201ENST00000402379 270 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 RNU6-575P-201ENST00000411326 105 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AIG1P1-201ENST00000503376 148 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 ARL2BPP5-201ENST00000523141 481 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AP003066.2-201ENST00000529375 555 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms