Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AP000526.1-201ENST00000603308 1388 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC099654.7-201ENST00000635788 2127 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 RPL23AP57-201ENST00000332361 466 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 MIR422A-201ENST00000362286 90 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 SNORA51.4-201ENST00000364993 124 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 MIR135A2-201ENST00000384854 100 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AL122016.1-201ENST00000403365 367 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AL513477.1-202ENST00000417061 214 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 BEND7P1-201ENST00000422058 457 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 MTND2P5-201ENST00000432656 1006 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC244505.4-201ENST00000434905 287 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 PTGES3P1-201ENST00000439531 483 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AL831737.1-201ENST00000441288 271 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 SSXP5-201ENST00000443473 287 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 MTCYBP11-201ENST00000447254 1109 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AP001486.1-201ENST00000463339 476 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 RPL27AP5-201ENST00000469428 449 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AL049873.1-201ENST00000480540 376 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 OR4G11P-201ENST00000492842 939 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC024224.1-201ENST00000538284 609 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC087897.1-201ENST00000550134 156 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC090695.1-201ENST00000561269 1222 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC015688.2-201ENST00000584523 262 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AL451007.1-201ENST00000595491 289 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC013444.2-201ENST00000603317 787 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 PRELID3BP8-201ENST00000604148 295 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AC004009.2-201ENST00000623016 728 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.84□□□□□ -1.95
KLHL28Q9NXS3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
KLHL28Q9NXS3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
KLHL28Q9NXS3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.84□□□□□ -1.96
KLHL28Q9NXS3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC093831.2-201ENST00000624393 3427 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 MTND5P19-201ENST00000424872 1794 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AL672167.1-206ENST00000356293 943 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 SNORA7.4-201ENST00000384249 137 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 UBA52P6-201ENST00000399822 382 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 RPL19P1-201ENST00000411635 428 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC019178.2-201ENST00000423595 505 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC024082.2-201ENST00000434771 238 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AL121871.1-201ENST00000443413 436 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 MTCYBP42-201ENST00000444653 1130 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 RPL39P6-201ENST00000448289 150 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC079776.3-201ENST00000450665 370 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 OR6K1P-201ENST00000456766 971 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 SNORA59A-201ENST00000459326 152 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC026410.2-201ENST00000460281 156 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 RN7SL283P-201ENST00000489055 303 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 RN7SKP272-201ENST00000516988 232 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 MIR5708-201ENST00000579723 85 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC008507.2-201ENST00000588402 1176 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC008739.2-201ENST00000597006 317 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AP002802.2-201ENST00000605877 235 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC004696.1-201ENST00000614345 607 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 OR5BR1P-201ENST00000524992 1330 ntBASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms