Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MIR5004-201ENST00000579078 107 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 MIR3609-201ENST00000582661 80 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC078899.3-201ENST00000599065 212 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 MIR7975-201ENST00000619350 68 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC004009.2-201ENST00000623016 728 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC027309.3-201ENST00000623419 351 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 CR381653.2-201ENST00000624041 768 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC087359.1-201ENST00000508335 1740 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLN6Q9NWW5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 MIR449B-201ENST00000384995 97 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLN6Q9NWW5 RNU6-1197P-201ENST00000391183 107 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 RPL7P10-201ENST00000417407 739 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC092573.2-201ENST00000434546 243 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 THAP5P1-201ENST00000439089 262 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 ARF4P4-201ENST00000439608 520 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 MTCYBP11-201ENST00000447254 1109 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 ST13P20-201ENST00000447996 1065 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 RPL39P6-201ENST00000448289 150 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC005297.2-201ENST00000450430 606 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC090525.1-201ENST00000479116 478 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.54□□□□□ -2
CLN6Q9NWW5 WBP1LP4-201ENST00000505043 344 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC113420.1-201ENST00000507903 571 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC092593.2-201ENST00000513866 913 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC008885.1-201ENST00000514930 301 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC104986.1-201ENST00000517978 436 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 GTF2IP8-201ENST00000560687 584 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 MIR3921-201ENST00000577308 85 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC079089.3-201ENST00000603094 673 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 DUXAP11-201ENST00000603858 526 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 ELOCP35-201ENST00000604289 336 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC069200.1-201ENST00000609511 323 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC010975.3-201ENST00000618727 978 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.54□□□□□ -2
CLN6Q9NWW5 AC026422.1-201ENST00000623961 452 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AC034229.5-201ENST00000624258 185 ntBASIC2.54□□□□□ -2
CLN6Q9NWW5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.54□□□□□ -2
CLN6Q9NWW5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.54□□□□□ -2
CLN6Q9NWW5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLN6Q9NWW5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CLN6Q9NWW5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AC099654.7-201ENST00000635788 2127 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLN6Q9NWW5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLN6Q9NWW5 MIR134-201ENST00000385258 73 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AL079342.2-201ENST00000403367 482 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AL356131.1-201ENST00000405826 414 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 MIR1290-201ENST00000408735 78 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 RPS7P9-201ENST00000414704 586 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AC069157.1-201ENST00000421749 137 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AC234781.2-201ENST00000426370 994 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AL590233.1-201ENST00000430017 456 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AL050321.1-201ENST00000432363 400 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AL591503.2-201ENST00000442314 1005 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 PRDX3P3-201ENST00000447765 522 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AC112492.1-201ENST00000449607 712 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AC010099.1-201ENST00000455434 375 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AP001992.1-205ENST00000462248 379 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AC009901.1-201ENST00000506703 541 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.53□□□□□ -2
CLN6Q9NWW5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.53□□□□□ -2
CLN6Q9NWW5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AC023825.1-201ENST00000566704 1030 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AC034105.4-201ENST00000568304 277 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AC105224.1-201ENST00000587055 421 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AC020895.1-201ENST00000595362 272 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms